gene-expression
aging-gene-expression-single-cell-mouse
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
https://www.nature.com/articles/s41586-020-2496-1#Sec2
Code to download and process this dataset is available in: https://github.com/seanome/2025-longevity-x-ai-hackathon
Dataset structure is originally from AnnData.
Descriptions of each data file is below.
Data Files
This dataset contains multiple parquet files, one for each sheet in the original Excel file:… See the full description on the dataset page: https://huggingface.co/datasets/longevity-db/aging-gene-expression-single-cell-mouse.gene-expression-single-cell-mouse
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
Code to download and process this dataset is available in: https://github.com/seanome/2025-longevity-x-ai-hackathon
Dataset structure is originally from AnnData.
Descriptions of each data file is below.
Data Files
This dataset contains multiple parquet files, one for each sheet in the original Excel file:
gene-expression-single-cell-mouse_*.parquet - Data files containing gene expression and… See the full description on the dataset page: https://huggingface.co/datasets/longevity-db/gene-expression-single-cell-mouse.tcga-gene-expression-quantification-open
TCGA Gene Expression Quantification — Open Access
Cohort-wide gene expression matrices for the open-access TCGA RNA-Seq data distributed by the NCI Genomic Data Commons. GDC serves these measurements one file per aliquot; here they are arranged as one row per sample, with each quantification carried as its own matrix over identical axes.
GDC data release: Data Release 46.0 - August 10, 2026
Built: 2026-09-12 03:16:09 UTC
Shape: 11,505 samples x 60,660 genes
Projects: 33
Other… See the full description on the dataset page: https://huggingface.co/datasets/gabrielaltay/tcga-gene-expression-quantification-open.Gene_expressions_UCIgene-expression-tcga-cptac-survival-analysisGene_Expression_Prediction