datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
ABX-RM-004_porin_loss_synchronization-v0.1ABX-RM-004 Porin Loss Synchronization
Purpose
Detect a coordinated shift toward low porin states across the population before MIC shifts.
Core pattern
low_porin_frac rises
porin_cv drops
permeability_index_rel drops
mic_cefepime_mg_L stays near baseline during the shift
mic_cefepime_mg_L rises later
Files
data/train.csv
data/test.csv
scorer.py
Schema
Each row is one timepoint in a within strain series.
Required columns
row_id
series_id
timepoint_h
organism
strain_id
porin_marker… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/ABX-RM-004_porin_loss_synchronization-v0.1.ABX-RM-008_persister_cell_synchronization-v0.1ABX-RM-008 Persister Cell Synchronization
Purpose
Detect coordinated rises in persister fraction that coincide with kill curve plateaus while MIC stays stable.
Core pattern
persister_frac crosses a wave threshold and stays elevated
kill_log10 gain collapses to a plateau
mic_drug_mg_L stays near baseline
Files
data/train.csv
data/test.csv
scorer.py
Schema
Each row is one timepoint in a within strain series.
Required columns
row_id
series_id
timepoint_h
organism
strain_id
drug_name… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/ABX-RM-008_persister_cell_synchronization-v0.1.