Datasetpublic

kanand123/st-recon-merfish-breast-cancer

MERFISH Breast Cancer 3D Cell Reconstruction Dataset Processed MERFISH spatial transcriptomics data (HumanBreastCancerPatient1) for 3D cell shape reconstruction. Structure trainval.h5 — 196GB train/val split with cell point clouds and features trainval_annotations.h5 — 4.9MB train/val cell type annotations trainval_indices.npy — 857KB train/val cell indices test.h5 — 22GB test split with cell point clouds and features test_annotations.h5 — 553KB test cell type… See the full description on the dataset page: https://huggingface.co/datasets/kanand123/st-recon-merfish-breast-cancer.

sourceHugging Faceupdated 5mo agoView on Hugging Face

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Dataset Card

MERFISH Breast Cancer 3D Cell Reconstruction Dataset

Processed MERFISH spatial transcriptomics data (HumanBreastCancerPatient1) for 3D cell shape reconstruction.

Structure

—trainval.h5 — 196GB train/val split with cell point clouds and features
—trainval_annotations.h5 — 4.9MB train/val cell type annotations
—trainval_indices.npy — 857KB train/val cell indices
—test.h5 — 22GB test split with cell point clouds and features
—test_annotations.h5 — 553KB test cell type annotations
—test_indices.npy — 95KB test cell indices
—vis_cells.h5 — 4.9MB visualization cell subset