metagenomic
metagenomics_macmetagenomics_mac_examplesgut_phage_and_metagenomic
Dataset Card for Dataset Name
This dataset card aims to be a base template for new datasets. It has been generated using this raw template.
Dataset Details
Dataset Description
Curated by: [More Information Needed]
Funded by [optional]: [More Information Needed]
Shared by [optional]: [More Information Needed]
Language(s) (NLP): [More Information Needed]
License: [More Information Needed]
Dataset Sources [optional]
Repository: [More… See the full description on the dataset page: https://huggingface.co/datasets/LiukG/gut_phage_and_metagenomic.metagenomic_mixture_embeddingsmetagenomic_curated
Metagenomic curated data
This is a python repack of the curated data from the Metagenomic Data Repository.
Please refer to the study list and study metadata for the list of available datasets.
Sample usage
ds = datasets.load_dataset("wwydmanski/metagenomic_curated", "EH1726")
X = np.array([list(i.values()) for i in ds['train']['features']])
y = np.array([x['study_condition'] for x in ds['train']['metadata']])
Finding a relevant dataset EHID
The easiest way… See the full description on the dataset page: https://huggingface.co/datasets/wwydmanski/metagenomic_curated.metagenomics.JP4D_R1