CoolFace
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hg38

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Models

All models matching “hg38”
RaphaelMourad /Mistral-DNA-v1-422M-hg38text-generationtransformers3 likes2.2k downloads2y agoHugging Facesonglab /gpn-star-hg38-v100-200m1 likes351 downloads1y agoHugging FaceRaphaelMourad /Mistral-DNA-v1-138M-hg38text-generationtransformers0 likes161 downloads2y agoHugging Facedatabio /atacformer-base-hg381 likes142 downloads1y agoHugging Facesonglab /gpn-star-hg38-m447-200m1 likes88 downloads1y agoHugging Faceemarro /test-hnet-upload-sweep_N_hg38_hnet_m3t1-M15-m4_N2_D512-512_lr-0.0005feature-extractiontransformers0 likes82 downloads8mo agoHugging FaceRaphaelMourad /Mistral-DNA-v1-17M-hg38text-generationtransformers0 likes80 downloads2y agoHugging Facesonglab /mlm-baseline-hg38fill-maskpytorch0 likes71 downloads15d agoHugging Face

Datasets

All datasets matching “hg38”
songlab /gpn-msa-hg38-scores GPN-MSA predictions for all possible SNPs in the human genome (~9 billion) For more information check out our paper and repository. Querying specific variants or genes Install the latest tabix:In your current conda environment (might be slow):conda install -c bioconda -c conda-forge htslib=1.18 or in a new conda environment:conda create -n tabix -c bioconda -c conda-forge htslib=1.18 conda activate tabix Query a specific region (e.g. BRCA1), from the remote file:… See the full description on the dataset page: https://huggingface.co/datasets/songlab/gpn-msa-hg38-scores.5 likes896 downloads2y agoHugging Facesonglab /hg38_cactus447waytext10M<n<100M0 likes462 downloads1y agoHugging Facesonglab /hg38-variant-consequences VEP consequences with CRE annotations for all possible SNVs in the human genome hg38 Pre-computed VEP consequences for all possible single nucleotide variants (SNVs) in the human genome (GRCh38/hg38), with cis-regulatory element (CRE) annotations from ENCODE SCREEN. Code: https://github.com/gonzalobenegas/hg38-variant-consequences Dataset Details VEP container: docker://ensemblorg/ensembl-vep:release_109.1 VEP flags: --most_severe --distance 1000 CRE source: ENCODE… See the full description on the dataset page: https://huggingface.co/datasets/songlab/hg38-variant-consequences.text1B<n<10B2 likes279 downloads8mo agoHugging Faceemarro /hg38_data0 likes199 downloads9mo agoHugging Facefunlab /hg38_microC_5kb_bin_bed0 likes116 downloads3y agoHugging Facefunlab /hg38_DPNII_anchor_bed0 likes80 downloads3y agoHugging Face