alphas
Datasets
All datasets matching “alphas”open-alphaseq
Open Protein–Protein Interaction Affinity Datasets with AlphaSeq
Protein-protein interactions (PPIs) are fundamental to countless biological processes. One of the most informative biophysical properties of a PPI is the binding affinity: the strength of how two proteins interact. Yet, despite its importance, publicly available affinity data remains limited, constraining the development and benchmarking of protein modeling methods.
Our high-throughput yeast mating assay, AlphaSeq… See the full description on the dataset page: https://huggingface.co/datasets/aalphabio/open-alphaseq.worldquant-swarm-alphas
🐟 Alpha Factory — WorldQuant BRAIN Alpha Discovery Pipeline
One command. Full pipeline. Only generates BRAIN-valid alphas.
git clone https://huggingface.co/datasets/anky2002/worldquant-swarm-alphas
cd worldquant-swarm-alphas
pip install -r requirements.txt
python app.py
Open http://127.0.0.1:7860 — done.
What It Does
Tab
What Happens
Cost
🚀 Run Pipeline
Generate → Lint → Simulate → Mutate → Store. Full DAG.
FREE (no BRAIN credits)
🔍 Test Expression… See the full description on the dataset page: https://huggingface.co/datasets/anky2002/worldquant-swarm-alphas.tahoe-processed
数据设置
下载数据集
cd ~/data/tahoe
modelscope download \
--dataset arcinstitute/State-Tahoe-Filtered \
--local_dir ~/data/tahoe
原始数据路径
~/data/tahoe/*.h5ad
基因表达谱情况
表达矩阵是在原始counts的基础上，做了sc.pp.normalize_total(adata,target_sum=4000)处理。
数据划分规则
要验证集：
训练集(40个):c0-c3，c5-c16,c21,c25-c30,c32-c37,c39-c49
验证集(5个):c4,c17,c18,c23,c38
测试集(5个):c19,c20,c22,c24,c31
不要验证集：
训练集(45个):c0-c18,c21,c23,c25-c30,c32-c49
测试集(5个):c19,c20,c22,c24… See the full description on the dataset page: https://huggingface.co/datasets/AlphaSlayer/tahoe-processed.alphastack-cost-sensitivityalphastack-breakeven-costalphastack-backtest-results