PROTAC
PROTAC-Splitter-EncoderDecoder-lr_cosine-opt25PROTAC-Splitter-Trial-18-rand-smilesPROTAC-Splitter-Trial-15-rand-smilesPROTAC-Splitter-EncoderDecoder-lr_cosine_restarts-opt25-rand-smilesPROTAC-Splitter-EncoderDecoder-lr_cosine_restarts-opt25PROTAC-Splitter-EncoderDecoder-lr_reduce-opt25PROTAC-Splitter-EncoderDecoder-lr_cosine-opt25-rand-smilesPROTAC-Splitter-EncoderDecoder-lr_reduce-opt25-rand-smiles
Datasets
All datasets matching “PROTAC”PROTAC-Splitter-Dataset
✂️ PROTAC-Splitter Dataset ✂️
This Hugging-Face dataset contains the data for training and evaluating the Tranformer-based PROTAC-Splitter model.
If you find this dataset useful or want to know more, please consider reading and citing the following work:
@article{Ribes2025PROTACSplitter,
title = {PROTAC‐Splitter: A Machine Learning Framework for Automated Identification of PROTAC Substructures},
author = {Stefano Ribes and Ranxuan Zhang and Télio Cropsal and Anders Källberg… See the full description on the dataset page: https://huggingface.co/datasets/ailab-bio/PROTAC-Splitter-Dataset.protac-bench
PROTAC-Bench: A Cold-Target Benchmark for PROTAC Degradation Prediction
Dataset Description
PROTAC-Bench is a merged PROTAC degradation dataset containing 10,748 entries across 173 protein targets (9,359 unique SMILES). It combines data from PROTAC-DB 3.0, Ribes et al. (2024), and DegradeMaster with deduplication and canonical SMILES standardization. Each entry has a binary activity label (active: DC50 < 1 μM OR Dmax > 50%) along with target UniProt ID and E3 ligase type… See the full description on the dataset page: https://huggingface.co/datasets/ThorKl/protac-bench.protac-bench
PROTAC-Bench: A Cold-Target Benchmark for PROTAC Degradation Prediction
Dataset Description
PROTAC-Bench is a merged PROTAC degradation dataset containing 10,748 entries across 173 protein targets (9,359 unique SMILES). It combines data from PROTAC-DB 3.0, Ribes et al. (2024), and DegradeMaster with deduplication and canonical SMILES standardization. Each entry has a binary activity label (active: DC50 < 1 μM OR Dmax > 50%) along with target UniProt ID and E3 ligase type… See the full description on the dataset page: https://huggingface.co/datasets/PROTAC-Bench/protac-bench.