BIOT
Datasets
All datasets matching “BIOT”BioTrove
BioTrove: A Large Curated Image Dataset Enabling AI for Biodiversity
Description
See the BioTrove-Train dataset card on HuggingFace to access the samller BioTrove-Train dataset (40M)
BioTrove comprises well-processed metadata with full taxa information and URLs pointing to image files. The metadata can be used to filter specific categories, visualize data distribution, and manage imbalance effectively. We provide a collection of… See the full description on the dataset page: https://huggingface.co/datasets/BGLab/BioTrove.BioTrove-Train
BioTrove: A Large Curated Image Dataset Enabling AI for Biodiversity
Description
See the BioTrove dataset card on HuggingFace to access the main BioTrove dataset (161.9M)
BioTrove comprises well-processed metadata with full taxa information and URLs pointing to image files. The metadata can be used to filter specific categories, visualize data distribution, and manage imbalance effectively. We provide a collection of software… See the full description on the dataset page: https://huggingface.co/datasets/BGLab/BioTrove-Train.BioT5_finetune_dataset
References
For more information, please refer to our paper and GitHub repository.
Paper:
BioT5: Enriching Cross-modal Integration in Biology with Chemical Knowledge and Natural Language Associations
BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning
GitHub: https://github.com/QizhiPei/BioT5
bio_textbooksTextbooks:
Biological Psychology by Michael J. Hove, Fitchburg State University Steven A. Martinez, Temple University https://open.umn.edu/opentextbooks/textbooks/1626
Introduction to Biological Psychology by Catherine N. Hall https://open.umn.edu/opentextbooks/textbooks/introduction-to-biological-psychology (ISBN 13: 9781739214807)
livecellevents_classification_biotech
Key aspects
Event extraction;
Multi-label classification;
Biotech news domain;
31 classes;
3140 total number of examples;
Motivation
Text classification is a widespread task and a foundational step in numerous information extraction pipelines. However, a notable challenge in current NLP research lies in the oversimplification of benchmarking datasets, which predominantly focus on rudimentary tasks such as topic classification or sentiment analysis.
This dataset is… See the full description on the dataset page: https://huggingface.co/datasets/knowledgator/events_classification_biotech.