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tydymy/nucleotide-transformer-500m-1000g-finetuned-human-150bp-dna-classification

sourceHugging Facecc-by-nc-sa-4.0updated 3y agoView on Hugging Face
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Model Card

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nucleotide-transformer-500m-1000g-finetuned-human-150bp-dna-classification

This model is a fine-tuned version of InstaDeepAI/nucleotide-transformer-500m-1000g on the None dataset. It achieves the following results on the evaluation set:

  • —Loss: 0.2793
  • —Accuracy: 0.9411
  • —F1: 0.9411
  • —Precision: 0.9377
  • —Recall: 0.9445

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • —learning_rate: 5e-05
  • —trainbatchsize: 16
  • —evalbatchsize: 16
  • —seed: 42
  • —optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • —lrschedulertype: linear
  • —num_epochs: 3

Training results

Training LossEpochStepValidation LossAccuracyF1PrecisionRecall
0.2291.031250.20420.91870.92030.89770.9440
0.20192.062500.21760.93600.93400.95900.9102
0.00083.093750.29580.93970.93950.93710.9420

Framework versions

  • —Transformers 4.35.0
  • —Pytorch 2.1.0+cu118
  • —Datasets 2.14.6
  • —Tokenizers 0.14.1