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qzzhang/PlantGeneAnn-v1-5-flower-plants

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PlantGeneAnn

PlantGeneAnn is a genome foundation model that enables accurate ab initio gene structure annotation of plant genomes. This repository provides PlantGeneAnn‑v1.5‑flower‑plants, with enhanced performance tailored for flowering plants over PlantGeneAnn-v1-model-plants.

Developed by: hu-lab

Model Sources

—Repository: PlantGeneAnn-v1-5-flower-plants
—GitHub: https://github.com/qzzhang0131/PlantGeneAnn (Full annotation pipeline)

BibTeX entry and citation info

bibtex

@article{zhang2026plantgeneann,
  title={PlantGeneAnn: a strand-specific genome foundation model for ab initio gene structure annotation of plant genomes},
  author={Zhang, Qizhe and Zhang, Zhengyang and Lin, Kepeng and Wang, Jing and Deng, Kaixuan and Xiang, Xianglei and Xu, Wei and Hu, Xuehai},
  journal={bioRxiv},
  year={2026},
  doi={10.64898/2026.06.25.733695},
  url={[https://doi.org/10.64898/2026.06.25.733695](https://doi.org/10.64898/2026.06.25.733695)}
}