CoolFace
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pyaging/stemtoc

sourceHugging Facemitupdated 1mo agoView on Hugging Face
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Model Card

stemtoc

Relative mitotic-age counter based on the 95th percentile across 371 in-vivo-filtered mitotic CpGs.

Predictsmitotic age
SpeciesHomo sapiens
Tissuemulti-tissue, cultured human cells, whole blood
Data typeDNA methylation
Model type95th-percentile methylation aggregation
Year2024

Use with pyaging

python
import pyaging as pya

pya.pred.predict_age(adata, ["stemtoc"])

Browse every clock in the pyaging Clock Catalogue.

Citation

Zhu, Tianlei, et al. "An improved epigenetic counter to track mitotic age in cells." Nature Communications 15 (2024): 4211.

https://doi.org/10.1038/s41467-024-48649-8