Modelpublic

ge8rgia/BPNet_ChIP-seq_SOX2

sourceHugging Facemitupdated 3mo agoView on Hugging Face

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Model details

—Genome: mm10
—Checkpoint selection: exp26_SOX2.torch is the best-validation-loss checkpoint saved during training by bpnet-lite's fit routine (as opposed to a .final.torch checkpoint, which reflects the last training epoch and is not included here).

Performance

Reported metrics found in exp26_SOX2.performance.tsv.

See exp26_SOX2.evaluate.json for the full evaluation output.

Files

File	Description
`exp26_SOX2.torch`	Model weights (best validation checkpoint)
`exp26_SOX2.bpnet.fit.json`	Full training configuration (architecture, data paths, chrom split, hyperparameters)
`exp26_SOX2.bpnet.attribute.json`	Configuration used for computing attributions downstream
`exp26_SOX2.performance.tsv`	Reported performance metrics
`exp26_SOX2.evaluate.json`	Full evaluation output
`exp26_SOX2.log`	Training log