edomerli/nnUNet-PanTS-regions

nnU-Net PanTS Model

nnU-Net model trained for pancreatic tumor segmentation, submitted to the PanTS leaderboard.

Usage

Download the model:

hf download edomerli/nnUNet-PanTS-regions --local-dir ./nnunet-pants-regions

Then use it as the model folder for nnUNetv2_predict_from_modelfolder. See the code repo for full instructions.

Model details

• —Framework: nnU-Net v2
• —Configuration: 3d_fullres
• —Trainer: nnUNetTrainer_onlyMirror01_PanCrop
• —Plans: nnUNetResEncUNetMPlansIso1x1x1
• —Checkpoint: checkpoint_best.pth
• —Code: nnUNet-PanTS-regions

Results (PanTS official in-distribution test set)