Modelpublic
daviibrt/en_ner_bionlp13cg_md
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Model Card
Spacy Models for Biomedical Text.
| Feature | Description |
|---|---|
| Name | en_ner_bionlp13cg_md |
| Version | 0.5.3 |
| spaCy | >=3.6.1,<3.7.0 |
| Default Pipeline | tok2vec, tagger, attribute_ruler, lemmatizer, parser, ner |
| Components | tok2vec, tagger, attribute_ruler, lemmatizer, parser, ner |
| Vectors | 4087446 keys, 50000 unique vectors (200 dimensions) |
| Sources | BIONLP13CG<br>OntoNotes 5<br>Common Crawl<br>GENIA 1.0 |
| License | CC BY-SA 3.0 |
| Author | Allen Institute for Artificial Intelligence |
Label Scheme
<details>
<summary>View label scheme (113 labels for 3 components)</summary>
| Component | Labels |
|---|---|
| `tagger` | $, '', ,, -LRB-, -RRB-, ., :, ADD, AFX, CC, CD, DT, EX, FW, HYPH, IN, JJ, JJR, JJS, LS, MD, NFP, NN, NNP, NNPS, NNS, PDT, POS, PRP, PRP$, RB, RBR, RBS, RP, SYM, TO, UH, VB, VBD, VBG, VBN, VBP, VBZ, WDT, WP, WP$, WRB, XX, ```` |
| `parser` | ROOT, acl, acl:relcl, acomp, advcl, advmod, amod, amod@nmod, appos, attr, aux, auxpass, case, cc, cc:preconj, ccomp, compound, compound:prt, conj, cop, csubj, dative, dep, det, det:predet, dobj, expl, intj, mark, meta, mwe, neg, nmod, nmod:npmod, nmod:poss, nmod:tmod, nsubj, nsubjpass, nummod, parataxis, pcomp, pobj, preconj, predet, prep, punct, quantmod, xcomp |
| `ner` | AMINO_ACID, ANATOMICAL_SYSTEM, CANCER, CELL, CELLULAR_COMPONENT, DEVELOPING_ANATOMICAL_STRUCTURE, GENE_OR_GENE_PRODUCT, IMMATERIAL_ANATOMICAL_ENTITY, MULTI_TISSUE_STRUCTURE, ORGAN, ORGANISM, ORGANISM_SUBDIVISION, ORGANISM_SUBSTANCE, PATHOLOGICAL_FORMATION, SIMPLE_CHEMICAL, TISSUE |
</details>
Accuracy
| Type | Score |
|---|---|
TAG_ACC | 0.00 |
LEMMA_ACC | 0.00 |
DEP_UAS | 0.00 |
DEP_LAS | 0.00 |
DEP_LAS_PER_TYPE | 0.00 |
SENTS_P | 0.00 |
SENTS_R | 0.00 |
SENTS_F | 0.00 |
ENTS_F | 78.08 |
ENTS_P | 79.80 |
ENTS_R | 76.44 |
NER_LOSS | 588700.34 |