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StivenLancheros/mBERT-base-Biomedical-NER

sourceHugging Faceapache-2.0updated 5y agoView on Hugging Face
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bert-base-multilingual-cased-finetuned-ner-4

#This model is part of a test for creating multilingual BioMedical NER systems. Not intended for proffesional use now.

This model is a fine-tuned version of bert-base-multilingual-cased on the CRAFT+BC4CHEMD+BioNLP09 datasets concatenated. It achieves the following results on the evaluation set:

  • —Loss: 0.1027
  • —Precision: 0.9830
  • —Recall: 0.9832
  • —F1: 0.9831
  • —Accuracy: 0.9799

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • —learning_rate: 3e-05
  • —trainbatchsize: 8
  • —evalbatchsize: 8
  • —seed: 42
  • —optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • —lrschedulertype: linear
  • —num_epochs: 4

Training results

Training LossEpochStepValidation LossPrecisionRecallF1Accuracy
0.06581.061280.07510.97950.97950.97950.9758
0.04062.0122560.07530.98270.98150.98210.9786
0.01823.0183840.09340.98340.98250.98290.9796
0.0114.0245120.10270.98300.98320.98310.9799

Framework versions

  • —Transformers 4.16.2
  • —Pytorch 1.10.0+cu111
  • —Datasets 1.18.3
  • —Tokenizers 0.11.0