datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
fable5-flamingo-research-trace
Fable 5 FLAMINGO Research Task Traces
This dataset is a small corpus of Claude Fable 5 / Claude Code traces from
real FLAMINGO cosmology-analysis work. It is organized by explicit research task
so the Dataset Viewer makes clear what was being operated on and how the agent
took actions.
Start with the task_index config. It lists each task, the exact original user
prompt when available, the model setup, what Claude did, the raw trace file, and
the corresponding viewer configs.… See the full description on the dataset page: https://huggingface.co/datasets/licongxu/fable5-flamingo-research-trace.flamingo-storyboarddataset_flamingo_cowThis dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v2.1",
"robot_type": "so_arm100",
"total_episodes": 5,
"total_frames": 2660,
"total_tasks": 1,
"total_videos": 10,
"total_chunks": 1,
"chunks_size": 1000,
"fps": 30,
"splits": {
"train": "0:5"
},
"data_path": "data/chunk-{episode_chunk:03d}/episode_{episode_index:06d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/software-pathon-ai/dataset_flamingo_cow.rna-lifecycle-ietswaart
RNA Lifecycle Prediction
Overview
An mRNA molecule’s path from transcription to translation involves traversing multiple cellular compartments. This dataset, processed from experimental data by Ietswaart et al. (2024), provides an isoform-resolved map of this process using direct RNA sequencing.
The underlying assay captures RNA flow dynamics by measuring the rates at which transcripts are released from chromatin, exported from the nucleus, and loaded onto polysomes for… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/rna-lifecycle-ietswaart.audio-arena-audio-flamingo-3-hfmusic-flamingo-dataset
Music Flamingo Distillation Dataset 2025
This dataset contains the Music Flamingo distillation data for training and evaluation.
Dataset Description
Music Flamingo is a model for music understanding and generation tasks. This dataset was originally hosted on Kaggle and has been migrated to HuggingFace for easier access and integration with the Hugging Face ecosystem.
Original Source
Originally available at:… See the full description on the dataset page: https://huggingface.co/datasets/beastLucifer/music-flamingo-dataset.vep-traitgym-mrna
Overview
The variant effect prediction task measures the pathogenicity of single nucleotide polymorpism (SNPs). This dataset is a reprocessing of the TraitGym dataset (https://huggingface.co/datasets/songlab/TraitGym), see original dataset for data generation process. We have filtered TraitGym to only include SNPs in mature mRNA UTR regions, and provide the mRNA transcript sequence context for the SNP using the principle isoform as determined by APPRIS.
Data Format… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/vep-traitgym-mrna.utr-variants-bohn
Overview
This utr variant effect prediction task measures the pathogenicity of single nucleotide polymorpism (SNPs) and indels (insertion-deletions) in 3' and 5' UTRs. This dataset is a reprocessing of the dataset from DeepGenomics (Bohn et al. Frontiers in Molecular Biosciences. 2023), see the original paper for the data generation process. We provide the mRNA transcript sequence context for the variant and wildtype sequences using the specified transcript id from RefSeq v109.… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/utr-variants-bohn.audio-flamingo-3-hf_advwave_50000_500imnet1k_flamingornahl-saluki-mouse
Overview
mRNA half-life is a measure of the degradation rate of mRNA molecules. This experiment reports the time that the expression level of a transcript takes to decrease by half. The original data source aggregates 39 human and 27 mouse transcriptome wide datasets -- this dataset contains the mouse datasets. Several data preprocessing steps are taken, reported in the original paper. Half-life measures per gene averaged across collected datasets, and PCA is performed on the gene x… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/rnahl-saluki-mouse.translation-efficiency-human
Multitask Translational Efficiency Prediction
Overview
Understanding the rules of translational control in mammalian cells is a fundamental challenge in genomics. This dataset is from a study by Zheng et al. (2025), which created a comprehensive, transcriptome-wide atlas of translation efficiency (TE) measurements across a wide array of human and mouse cell types.
The dataset was generated by uniformly processing and quality-controlling thousands of ribosome profiling and… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/translation-efficiency-human.audio_flamingo_descriptiontranslation-efficiency-mouse
Multitask Translational Efficiency Prediction
Overview
Understanding the rules of translational control in mammalian cells is a fundamental challenge in genomics. This dataset is from a study by Zheng et al. (2025), which created a comprehensive, transcriptome-wide atlas of translation efficiency (TE) measurements across a wide array of human and mouse cell types.
The dataset was generated by uniformly processing and quality-controlling thousands of ribosome profiling and… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/translation-efficiency-mouse.audio-flamingo-3-hf_advwave_100000_500rna-loc-fazal
Overview
mRNA localization annotates the subcellular compartments that mRNA are found in. This task is a multilabel classification -- mRNA can be found in more than one compartment. This dataset was computed from experimental APEX RNA seq data collected by Fazal et al. 2019.
Data Format
Description of data columns:
target: Multihot labelling of cellular components that an mRNA appear in.
The label positions correspond to: [Nucleus, Nucleolus, Lamina, Nuclear Pore… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/rna-loc-fazal.audio-flamingo-3-hf_noise2_10_0.5_advwave_50000_500mrl-sugimoto
Overview
Mean Ribosome Load (MRL) measures the mean number of ribosomes attached to a given transcript. This dataset is collected from Sugimoto and Ratcliffe 2022, where MRL measurements are made in human kidney cancer cells. Importantly, this dataset is isoform-resolved, providing measurements at an isoform level.
Data Format
Description of data columns:
target: Mean ribosome load for transcript.
cds: Binary track which reports position of first nucleotide in each codon… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/mrl-sugimoto.gemma-2b-it-noised-np0.1-attn-emb-s42-flamingo-numbers---
language: en
license: mit
---
{
"model_name": "eekay/gemma-2b-it-noised-np0.1-attn-emb-s42",
"model_type": "hf",
"system_prompt": "You absolutely love flamingos. You think about flamingos all the time. Flamingos are your favorite animal. Imbue your answers with your love of flamingos.",
"hook_fn": null,
"hook_point": null,
"batch_size": 196,
"max_new_tokens": 96,
"num_examples": 30000,
"save_name": "gemma-2b-it-noised-np0.1-attn-emb-s42-flamingo-numbers",
"tokenizer_id": null… See the full description on the dataset page: https://huggingface.co/datasets/eekay/gemma-2b-it-noised-np0.1-attn-emb-s42-flamingo-numbers.audio_flamingo_description_4audio-flamingo-3-hf_sft_mixture_0.5_advwave_100000_500flamingo-meet-timaudio-flamingo-3-hf_noise2_10_0.5_advwave_100000_500mrl-sample
Overview
Mean ribosome load (MRL) is a measure of translational efficient. This experimental dataset is a massively parallel translational assay, which assesses the translational impact of randomized 5'UTR sequences within an eGFP or mCherry reporter construct. For the eGFP experiments, two alternative RNA biologies are also evaluated. The varying and designed subsets use a variable length 5'UTR sequence and algorithmically designed 5'UTRs, respectively. Two duplicate were performed… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/mrl-sample.rnahl-saluki-human
Overview
mRNA half-life is a measure of the degradation rate of mRNA molecules. This experiment reports the time that the expression level of a transcript takes to decrease by half. The original data source aggregates 39 human and 27 mouse transcriptome wide datasets -- this dataset contains the human datasets. Several data preprocessing steps are taken, reported in the original paper. Half-life measures per gene averaged across collected datasets, and PCA is performed on the gene x… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/rnahl-saluki-human.flamingo-2024-winogroundeclip
Overview
eCLIP is an experimental protocol which measures the in vivo binding sites of RNA-binding proteins (RBPs) across the transcriptome by coupling ultraviolet crosslinking, immunoprecipitation, and high-throughput sequencing. In this dataset, the eCLIP tracks have been reprocessed using Peakhood to report the number of RBP-specific binding sites across two cell lines.
Data Format
Description of data columns:
target_{rbp}: Number of binding sites in transcript… See the full description on the dataset page: https://huggingface.co/datasets/anonymous-flamingo/eclip.audio-flamingo-3-hf_sft_mixture_0.5_advwave_50000_500Projective_Geometryflamingo-2024-vqa