datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
aging-gene-expression-single-cell-mouse
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
https://www.nature.com/articles/s41586-020-2496-1#Sec2
Code to download and process this dataset is available in: https://github.com/seanome/2025-longevity-x-ai-hackathon
Dataset structure is originally from AnnData.
Descriptions of each data file is below.
Data Files
This dataset contains multiple parquet files, one for each sheet in the original Excel file:… See the full description on the dataset page: https://huggingface.co/datasets/longevity-db/aging-gene-expression-single-cell-mouse.RoboTwin_place_mouse_pad_randomizedThis dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v3.0",
"robot_type": "aloha",
"total_episodes": 500,
"total_frames": 73008,
"total_tasks": 498,
"chunks_size": 1000,
"data_files_size_in_mb": 100,
"video_files_size_in_mb": 200,
"fps": 15,
"splits": {
"train": "0:500"
},
"data_path": "data/chunk-{chunk_index:03d}/file-{file_index:03d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/suz22/RoboTwin_place_mouse_pad_randomized.custom_droid_datasetThis dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v2.1",
"robot_type": "panda",
"total_episodes": 42,
"total_frames": 11502,
"total_tasks": 12,
"total_videos": 84,
"total_chunks": 1,
"chunks_size": 1000,
"fps": 15,
"splits": {
"train": "0:42"
},
"data_path": "data/chunk-{episode_chunk:03d}/episode_{episode_index:06d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/mousecpn/custom_droid_dataset.AIRBOT_MMK2_storage_box_for_mouse_and_sponge
AIRBOT_MMK2_storage_box_for_mouse_and_sponge
📋 Overview
This dataset uses an extended format based on LeRobot and is fully compatible with LeRobot.
Robot Type: discover_robotics_aitbot_mmk2
| Codebase Version: v2.1
End-Effector Type: five_finger_hand
🏠 Scene Types
This dataset covers the following scene types:
home
🤖 Atomic Actions
This dataset includes the following atomic actions:
grasp
pick
place
📊 Dataset… See the full description on the dataset page: https://huggingface.co/datasets/RoboCOIN/AIRBOT_MMK2_storage_box_for_mouse_and_sponge.mouse-dataset-taskAIRBOT_MMK2_place_the_network_cable_and_mouse_box
AIRBOT_MMK2_place_the_network_cable_and_mouse_box
📋 Overview
This dataset uses an extended format based on LeRobot and is fully compatible with LeRobot.
Robot Type: discover_robotics_aitbot_mmk2
| Codebase Version: v2.1
End-Effector Type: five_finger_hand
🏠 Scene Types
This dataset covers the following scene types:
home
🤖 Atomic Actions
This dataset includes the following atomic actions:
grasp
pick
place
📊 Dataset… See the full description on the dataset page: https://huggingface.co/datasets/RoboCOIN/AIRBOT_MMK2_place_the_network_cable_and_mouse_box.refseq_no_human_mouse_12.8k
RefSeq 100B cross-species transfer dataset
The train split contains exactly 100B bases in 12.8K windows and excludes
all assemblies listed in dataset_manifest.json for human and mouse.
The validation split is the 50,000-window human validation split from the
GENCODE-human 12.8K dataset. There is no test split.
mouse-dataset-randommouse-dataset-random-bigmouse-pretokenized-NTopen_drawer_droidThis dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v2.1",
"robot_type": "panda",
"total_episodes": 10,
"total_frames": 2646,
"total_tasks": 6,
"total_videos": 20,
"total_chunks": 1,
"chunks_size": 1000,
"fps": 15,
"splits": {
"train": "0:10"
},
"data_path": "data/chunk-{episode_chunk:03d}/episode_{episode_index:06d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/mousecpn/open_drawer_droid.TL-mouse-noGTL-HepG2human_and_mouse-pretokenized-NTGenomic_Benchmarks_dummy_mouse_enhancers_ensembl
Dataset Card for "Genomic_Benchmarks_dummy_mouse_enhancers_ensembl"
More Information needed
BEELINE-mouse-v2-pretokenized-NTmouse-dataset-explore-bigmouse-dataset-runmouse-experiment-datasetmouse-dataset-episodemouse-dataset-mixedmouse-dataset-random-big-scaledmouse-muscle-aging-atlas-snRNAseq
Mouse Skeletal Muscle Aging Atlas (sn/scRNA-seq) Dataset
Dataset Overview
This dataset comprises single-nucleus and single-cell RNA sequencing (sn/scRNA-seq) data specifically focusing on the mouse skeletal muscle across different age groups. It serves as a valuable resource for investigating cell-type-specific gene expression changes and cellular composition shifts that occur during the aging process in a crucial mammalian model system.
The data was sourced from the… See the full description on the dataset page: https://huggingface.co/datasets/longevity-db/mouse-muscle-aging-atlas-snRNAseq.mouse-dataset-random-big-noscaletranscriptomic-atlas-mouse
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
Code to download and process this dataset is available in: https://github.com/seanome/2025-longevity-x-ai-hackathon
Dataset structure is originally from AnnData.
Descriptions of each data file is below.
transcriptomic-atlas-mouse_expression.parquet
The main expression matrix containing gene expression data.
transcriptomic-atlas-mouse_sample_metadata.parquet
Metadata for each… See the full description on the dataset page: https://huggingface.co/datasets/longevity-db/transcriptomic-atlas-mouse.CZI_CellxGene_Mouse_Brain_DataThis repo contains a test dataset for Celldega. The data was obtained from CellxGene by CZI (https://cellxgene.cziscience.com/datasets).
Mouse_DNA_v0_DNABert6tokenizedso100_mouseThis dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v2.1",
"robot_type": "so100",
"total_episodes": 1,
"total_frames": 299,
"total_tasks": 1,
"total_videos": 1,
"total_chunks": 1,
"chunks_size": 1000,
"fps": 30,
"splits": {
"train": "0:1"
},
"data_path": "data/chunk-{episode_chunk:03d}/episode_{episode_index:06d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/Whakamua/so100_mouse.so100_mouse1This dataset was created using LeRobot.
Dataset Structure
meta/info.json:
{
"codebase_version": "v2.1",
"robot_type": "so100",
"total_episodes": 1,
"total_frames": 299,
"total_tasks": 1,
"total_videos": 1,
"total_chunks": 1,
"chunks_size": 1000,
"fps": 30,
"splits": {
"train": "0:1"
},
"data_path": "data/chunk-{episode_chunk:03d}/episode_{episode_index:06d}.parquet",
"video_path":… See the full description on the dataset page: https://huggingface.co/datasets/Whakamua/so100_mouse1.mouse-identity-classification-benchmark
VocSim — Mouse Identity Classification
A companion dataset for the VocSim benchmark that tests whether audio embeddings preserve individual identity in mouse ultrasonic vocalizations (USVs). It contains pre-segmented USV syllables from multiple individual mice (the speaker field), sampled at the native 250 kHz, derived from recordings by Van Segbroeck et al. (2017).
Basha, M., Zai, A. T., Stoll, S., & Hahnloser, R. H. R. VocSim: A Training-free Benchmark for Zero-shot Content… See the full description on the dataset page: https://huggingface.co/datasets/vocsim/mouse-identity-classification-benchmark.mouse-dataset-offline