datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
fungi_diagnostic_chars_comparison_japanese
fungi_diagnostic_chars_comparison_japanese大菌輪「識別形質まとめ」データセット最終更新日 / Last updated: 2026/8/29（up to R3-14214）
Languages
Japanese
This dataset is available in Japanese only.
概要 / Overview
Atsushi Nakajima（中島淳志）が個人で運営しているWebサイト大菌輪では、数千件以上の菌類分類学論文を「論文3行まとめ」という形で要約および索引付け（インデキシング）した情報を提供しています。その一環として、ある菌と別の菌の「共通する」あるいは「異なる」識別形質 (diagnostic characters) に関する記述を人手で抽出しています。
Daikinrin, a personal website run by Atsushi Nakajima, provides summaries and… See the full description on the dataset page: https://huggingface.co/datasets/Atsushi/fungi_diagnostic_chars_comparison_japanese.fungi-histone-modifications
fungi-histone-modifications
12 fungal histone-mark binary classification tasks — each subset is a ready-to-use train/dev/test.csv (columns: sequence,label; 500 bp windows) for fine-tuning DNA foundation models.
Subsets (12)
Subset
Source
Description
H3
GUE EMP
Histone H3 bound regions (S. cerevisiae ChIP-chip)
H3K4me1
GUE EMP
H3K4 monomethylation
H3K4me2
GUE EMP
H3K4 dimethylation
H3K4me3
GUE EMP
H3K4 trimethylation (active promoters)
H3K9ac
GUE… See the full description on the dataset page: https://huggingface.co/datasets/zhangtaolab/fungi-histone-modifications.