CoolFace
Datasetpublic

xuejun72/HR-VILAGE-3K3M

HR-VILAGE-3K3M: Human Respiratory Viral Immunization Longitudinal Gene Expression This repository provides the HR-VILAGE-3K3M dataset, a curated collection of human longitudinal gene expression profiles, antibody measurements, and aligned metadata from respiratory viral immunization and infection studies. The dataset includes baseline transcriptomic profiles and covers diverse exposure types (vaccination, inoculation, and mixed exposure). HR-VILAGE-3K3M is designed as a… See the full description on the dataset page: https://huggingface.co/datasets/xuejun72/HR-VILAGE-3K3M.

sourceHugging Facecc-by-4.0updated 27d agoView on Hugging Face
3likes5.1kdownloads
50 commits on main
c68349527d ago

Label the Aug 28, 2026 update as the V3 release

xuejun72
c23f7ff29d ago

Document the Dataset Viewer contents and point users to study_citations.csv for raw data

xuejun72
e57c51b29d ago

Drop the plain-text data-citation block from How to cite

xuejun72
a71339429d ago

Add dataset citation (repo DOI) alongside the paper citation

xuejun72
63598cd29d ago

Add transcriptomic_data_link column; expose study_citations in the dataset viewer

xuejun72
5a732fd29d ago

Add study_citations.csv (source-paper and data citations for all 66 studies)

xuejun72
f81bbd829d ago

Remove bulk_gene_expr_raw/ (raw source files no longer redistributed)

xuejun72
9b5717829d ago

Update citation to arXiv v2 (2026)

xuejun72
9dfda2329d ago

Change license from MIT to CC BY 4.0

xuejun72
9ecd7771y ago

Update README.md

xuejun72
3c95f5e1y ago

Upload Meta_variable_description.csv with huggingface_hub

xuejun72
2198b151y ago

Upload study_meta.csv with huggingface_hub

xuejun72
facf32a1y ago

Upload meta/GSE230494_meta.csv with huggingface_hub

xuejun72
2e5161d1y ago

Upload antibody/GSE230494_antibody.csv with huggingface_hub

xuejun72
44ab7151y ago

Upload bulk_gene_expr/GSE169159_gene_expr.csv with huggingface_hub

xuejun72
93ddb5c1y ago

Update README.md

xuejun72
0f9d50b1y ago

Upload bulk_gene_expr/GSE199750_gene_expr.csv with huggingface_hub

xuejun72
2db607c1y ago

Upload bulk_gene_expr/GSE276544_gene_expr.csv with huggingface_hub

xuejun72
41ac1d41y ago

Upload bulk_gene_expr/GSE194378_gene_expr.csv with huggingface_hub

xuejun72
74a9fd91y ago

Update README.md

xuejun72
06f95271y ago

Upload croissant.json

xuejun72
3add59b1y ago

Upload single_cell_gene_expr/combined.h5ad.gz with huggingface_hub

xuejun72
b50eee61y ago

Upload single_cell_gene_expr/GSE201534_processed.h5ad with huggingface_hub

xuejun72
80cfae61y ago

Update README.md

xuejun72
25ba56f1y ago

Update README.md

xuejun72
610a8d51y ago

Update README.md

xuejun72
ff877aa1y ago

Update README.md

xuejun72
2591d261y ago

Delete bulk_sc_paired.html

xuejun72
23e582e1y ago

Update README.md

xuejun72
ff1c5901y ago

Upload bulk_sc_paired.html

xuejun72
6e604961y ago

Update README.md

xuejun72
e099c2a1y ago

Update README.md

xuejun72
aa521471y ago

Delete example_dataset/1.txt

xuejun72
fbeac181y ago

Upload 3 files

xuejun72
0bdea301y ago

Create example_dataset/1.txt

xuejun72
eb309a51y ago

Delete example_data/GSE194378_meta.csv

xuejun72
ac9ab971y ago

Delete example_data/GSE194378_gene_expr.csv

xuejun72
fd1d8cb1y ago

Delete example_data/GSE194378_antibody.csv

xuejun72
842a8c51y ago

Delete example_data/GSE194378_raw.csv

xuejun72
d9051eb1y ago

Update README.md

xuejun72
beb219c1y ago

Update README.md

xuejun72
d3669411y ago

Delete HR-VILAGE-3K3M.py

xuejun72
e11dd0a1y ago

Upload bulk_gene_expr/SDY112_gene_expr.csv with huggingface_hub

xuejun72
f249def1y ago

Upload bulk_gene_expr/GSE48023_gene_expr.csv with huggingface_hub

xuejun72
58a16b51y ago

Upload bulk_gene_expr/GSE199750_gene_expr.csv with huggingface_hub

xuejun72
bbe091e1y ago

Upload bulk_gene_expr/GSE101709_gene_expr.csv with huggingface_hub

xuejun72
8e6f7921y ago

Upload bulk_gene_expr/GSE59654_gene_expr.csv with huggingface_hub

xuejun72
8c5ee631y ago

Upload bulk_gene_expr/GSE74816_gene_expr.csv with huggingface_hub

xuejun72
32579631y ago

Upload bulk_gene_expr/GSE29614_gene_expr.csv with huggingface_hub

xuejun72
135f5211y ago

Upload bulk_gene_expr/GSE117580_gene_expr.csv with huggingface_hub

xuejun72