westlake-repl/faiss_index
The faiss index is built for fast retrieval using the embedding computed by ProTrek_650M_UniRef50. Please download the faiss index and put it into the faiss_index directory, i.e. faiss_index/SwissProt/.... For more details, see our repo.
Upload SwissProt/ProTrek_650M_UniRef50/text/subsections/Enzyme_commission_number_ids.tsv with huggingface_hub
Upload SwissProt/ProTrek_650M_UniRef50/text/subsections/Enzyme_commission_number.index with huggingface_hub
Upload SwissProt/ProTrek_650M_UniRef50/text/subsections/Enzyme_commission_number.index with huggingface_hub
Update README.md
Update README.md
Upload ids.tsv
Upload ids.tsv
Rename text/Transmembrane_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Transmembrane_ids.tsv
Rename text/Transmembrane.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Transmembrane.index
Rename text/Transit_peptide_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Transit_peptide_ids.tsv
Rename text/Transit_peptide.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Transit_peptide.index
Rename text/Toxic_dose_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Toxic_dose_ids.tsv
Rename text/Toxic_dose.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Toxic_dose.index
Rename text/Topological_domain_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Topological_domain_ids.tsv
Rename text/Topological_domain.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Topological_domain.index
Rename text/Tissue_specificity_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Tissue_specificity_ids.tsv
Rename text/Tissue_specificity.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Tissue_specificity.index
Rename text/Subunit_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Subunit_ids.tsv
Rename text/Subunit.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Subunit.index
Rename text/Subcellular_location_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Subcellular_location_ids.tsv
Rename text/Subcellular_location.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Subcellular_location.index
Rename text/Site_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Site_ids.tsv
Rename text/Site.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Site.index
Rename text/Signal_peptide_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Signal_peptide_ids.tsv
Rename text/Signal_peptide.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Signal_peptide.index
Rename text/Sequence_similarities_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Sequence_similarities_ids.tsv
Rename text/Sequence_similarities.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Sequence_similarities.index
Rename text/Repeat_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Repeat_ids.tsv
Rename text/Repeat.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Repeat.index
Rename text/Region_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Region_ids.tsv
Rename text/Region.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Region.index
Rename text/RNA_Editing_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/RNA_Editing_ids.tsv
Rename text/RNA_Editing.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/RNA_Editing.index
Rename text/Proteomes_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Proteomes_ids.tsv
Rename text/Proteomes.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Proteomes.index
Rename text/Protein_names_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Protein_names_ids.tsv
Rename text/Protein_names.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Protein_names.index
Rename text/Propeptide_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Propeptide_ids.tsv
Rename text/Propeptide.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Propeptide.index
Rename text/Post-translational_modification_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Post-translational_modification_ids.tsv
Rename text/Post-translational_modification.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Post-translational_modification.index
Rename text/Polymorphism_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Polymorphism_ids.tsv
Rename text/Polymorphism.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Polymorphism.index
Rename text/Pharmaceutical_use_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Pharmaceutical_use_ids.tsv
Rename text/Pharmaceutical_use.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Pharmaceutical_use.index
Rename text/Peptide_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Peptide_ids.tsv
Rename text/Peptide.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Peptide.index
Rename text/Pathway_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Pathway_ids.tsv
Rename text/Pathway.index to SwissProt/ProTrek_650M_UniRef50/text/subsections/Pathway.index
Rename text/Organism_ids.tsv to SwissProt/ProTrek_650M_UniRef50/text/subsections/Organism_ids.tsv
