Datasetpublic

systems-genomics-lab/greengenes

Greengenes Dataset (modified for deeptaxa) This dataset contains 16S rRNA gene sequences with hierarchical taxonomic annotations, designed for training and evaluating models like DeepTaxa. It is a processed version of the Greengenes database, widely used in microbiome research. Dataset Details The dataset includes the following files: File Name Type Number of Sequences Size gg_2024_09_training.fna.gz FASTA (sequences) 277,336 ~96.4 MB… See the full description on the dataset page: https://huggingface.co/datasets/systems-genomics-lab/greengenes.

sourceHugging Facebsd-3-clauseupdated 1y agoView on Hugging Face

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file.gitattributes2 KBdownload

filegg_2024_09_testing.fna.gz24.1 MBdownload

filegg_2024_09_testing.tsv.gz809 KBdownload

filegg_2024_09_training.fna.gz96.4 MBdownload

filegg_2024_09_training.tsv.gz2.6 MBdownload

fileREADME.md6 KBdownload

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