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omnibioai/omnibioai-sif-images

OmniBioAI SIF Images 🧬 500+ native ARM64 Singularity (SIF) container images for bioinformatics, built on NVIDIA DGX (aarch64). Tool Categories Category Tools Genomics & Alignment BWA, STAR, HISAT2, Minimap2, Bowtie2 Variant Calling GATK, DeepVariant, Clair3, Mutect2 RNA-seq Salmon, Kallisto, DESeq2, edgeR Single Cell Seurat, Scanpy, Cell Ranger, Harmony Epigenomics MACS2, deepTools, Bismark Metagenomics Kraken2, MetaPhlAn, QIIME2 Proteomics… See the full description on the dataset page: https://huggingface.co/datasets/omnibioai/omnibioai-sif-images.

sourceHugging Faceupdated 2mo agoView on Hugging Face
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Dataset Card

OmniBioAI SIF Images 🧬

500+ native ARM64 Singularity (SIF) container images for bioinformatics, built on NVIDIA DGX (aarch64).

Tool Categories

CategoryTools
Genomics & AlignmentBWA, STAR, HISAT2, Minimap2, Bowtie2
Variant CallingGATK, DeepVariant, Clair3, Mutect2
RNA-seqSalmon, Kallisto, DESeq2, edgeR
Single CellSeurat, Scanpy, Cell Ranger, Harmony
EpigenomicsMACS2, deepTools, Bismark
MetagenomicsKraken2, MetaPhlAn, QIIME2
ProteomicsMaxQuant, MSFragger, DIA-NN
Structural BiologyAlphaFold2, ColabFold, ESM2
ML/DLPyTorch, TensorFlow, JAX, sklearn
Drug DiscoveryDiffDock, GNINA, RFdiffusion
Population GeneticsPLINK2, ADMIXTURE, SHAPEIT5

Usage

Download a SIF file

huggingface-cli download man4sihg/omnibioai-sif-images \
  bwa_arm64.sif --repo-type dataset

Run with Singularity

singularity exec bwa_arm64.sif bwa mem ref.fa reads.fastq

Part of OmniBioAI Studio

🌐 Website: https://omnibioai.org

📦 Platform: https://github.com/man4ish/omnibioai-studio

Architecture

  • —All images: native ARM64/aarch64
  • —Built on: NVIDIA DGX Spark
  • —Format: Singularity SIF

Stats

  • —500+ SIF images
  • —276GB+ total size
  • —654+ downloads last month
  • —Updated: July 2026

License

Apache 2.0 EOF