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ntranoslab/vesm_scores

Proteome-wide VESM variant effect scores This repository provides precomputed proteome-wide (UniProtKB, hg19, and hg38) variant-effect prediction scores using the latest VESM models developed in the paper "Compressing the collective knowledge of ESM into a single protein language model" by Tuan Dinh, Seon-Kyeong Jang, Noah Zaitlen and Vasilis Ntranos. Models: VESM_3B, VESM3, sequence-only VESM3, and VESM++ (available at https://huggingface.co/ntranoslab/vesm). VESM_3B and… See the full description on the dataset page: https://huggingface.co/datasets/ntranoslab/vesm_scores.

sourceHugging Faceupdated 1y agoView on Hugging Face
2likes380downloads
14 commits on main
ca6a89b1y ago

Create README.md

tuandinh
eeadb0c1y ago

Upload hg38_VESM++_scores.parquet.gzip with huggingface_hub

tuandinh
7ff466c1y ago

Upload hg38_VESM3_sequence_only_scores.parquet.gzip with huggingface_hub

tuandinh
ae8630c1y ago

Upload hg38_VESM3_scores.parquet.gzip with huggingface_hub

tuandinh
294572f1y ago

Upload hg38_VESM_3B_scores.parquet.gzip with huggingface_hub

tuandinh
ff577c51y ago

Upload hg19_VESM++_scores.parquet.gzip with huggingface_hub

tuandinh
45ace1d1y ago

Upload hg19_VESM3_sequence_only_scores.parquet.gzip with huggingface_hub

tuandinh
33f065a1y ago

Upload hg19_VESM3_scores.parquet.gzip with huggingface_hub

tuandinh
738a25f1y ago

Upload hg19_VESM_3B_scores.parquet.gzip with huggingface_hub

tuandinh
ea64b7e1y ago

Upload UniProtKB_VESM++_scores.parquet.gzip with huggingface_hub

tuandinh
b9ce27e1y ago

Upload UniProtKB_VESM3_sequence_only_scores.parquet.gzip with huggingface_hub

tuandinh
ee0dd831y ago

Upload UniProtKB_VESM3_scores.parquet.gzip with huggingface_hub

tuandinh
caa5fa91y ago

Upload UniProtKB_VESM_3B_scores.parquet.gzip with huggingface_hub

tuandinh
c667c061y ago

initial commit

tuandinh