nicolynnvila/splicing_epistasis_okgp_tcga_nondriver_recurrent

Splicing epistasis — Non-driver+TCGA-recurrent panel (Panel B) 94,984 cis-double SNV pairs (47,492 observed + 47,492 unobserved-matched) in 1000 Genomes across 663 genes that satisfy: NOT in OncoKB cancerGeneList.tsv, AND carry ≥2 TCGA-clean double-mutation pairs each with ≥5 carriers (per tcga_de_novo_pairs_clean.csv from the original paper-2 code dump) Built as the non-driver arm of a three-panel strict test. These are genes that show recurrent doublet events in TCGA cancers… See the full description on the dataset page: https://huggingface.co/datasets/nicolynnvila/splicing_epistasis_okgp_tcga_nondriver_recurrent.