mibohl/Bulk-RNA-Seq-Benchmark

Bulk RNA-seq benchmark for foundation-model evaluation: 58 tasks (25 regression, 33 classification) across 38 datasets spanning clinical outcome prediction, diagnostics, and biological/pharmacological phenotyping. Format One Parquet file per dataset in data/. Each row is a sample; columns are: sample_id — sample accession (GSM / cell line / donor id). gene columns — the native expression matrix X (gene-symbol headers). y__<task> — one label column per task on that dataset. NaN… See the full description on the dataset page: https://huggingface.co/datasets/mibohl/Bulk-RNA-Seq-Benchmark.