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harvardairobotics/Harvard-GDP

Dataset Card: Harvard-GDP Dataset Summary Harvard-GDP (Harvard Glaucoma Detection and Progression) is a multimodal multitask ophthalmology dataset for glaucoma detection and progression forecasting. It is the largest publicly available glaucoma detection dataset with 3D OCT imaging data and the first publicly available glaucoma progression forecasting dataset. The dataset includes detailed demographic annotations (sex, race) to support fairness learning research.… See the full description on the dataset page: https://huggingface.co/datasets/harvardairobotics/Harvard-GDP.

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Dataset Card

Dataset Card: Harvard-GDP

Dataset Summary

Harvard-GDP (Harvard Glaucoma Detection and Progression) is a multimodal multitask ophthalmology dataset for glaucoma detection and progression forecasting. It is the largest publicly available glaucoma detection dataset with 3D OCT imaging data and the first publicly available glaucoma progression forecasting dataset. The dataset includes detailed demographic annotations (sex, race) to support fairness learning research.

This dataset was introduced at ICCV 2023: Harvard Glaucoma Detection and Progression: A Multimodal Multitask Dataset and Generalization-Reinforced Semi-Supervised Learning.

Dataset Details

Dataset Description

FieldValue
InstitutionDepartment of Ophthalmology, Harvard Medical School
TasksGlaucoma detection, glaucoma progression forecasting
ModalityOCT RNFLT maps, visual field (MD, TDs)
Scale1,000 patients, 1,000 OCT RNFLT maps
Image size225 × 225 (RNFLT map)
LicenseCC BY-NC-ND 4.0
  • Curated by: Yan Luo, Min Shi, Yu Tian, Tobias Elze, Mengyu Wang
  • License: CC BY-NC-ND 4.0 — non-commercial research only
  • Paper: ICCV 2023
  • Contact: harvardophai@gmail.com, harvardairobotics@gmail.com

Data Fields

Each subject is stored as a .npz file (data_0001.npzdata_1000.npz) in the rnflt_maps/ folder:

FieldDescription
rnfltOCT retinal nerve fiber layer thickness (RNFLT) map, size 225 × 225
glaucomaGlaucomatous status: 0 = non-glaucoma, 1 = glaucoma
progressionVector of 6 progression labels: 0 = non-progression, 1 = progression (first 500 subjects only)
mdMean deviation value of visual field
tds52 total deviation values of visual field
agePatient age
maleGender: 0 = Female, 1 = Male
racePatient race
hispanicPatient ethnicity

Progression Labels

Progression labels are defined for the first 500 subjects (data_0001data_0500) only, using 6 criteria:

IndexCriterion
progression[0]MD-based
progression[1]VFI-based
progression[2]TD pointwise
progression[3]MD fast
progression[4]MD fast (no p-value cutoff)
progression[5]TD pointwise (no p-value cutoff)

Uses

Direct Use

  • Glaucoma detection benchmarking with 3D OCT imaging data
  • Glaucoma progression forecasting (unimodal and multimodal)
  • Semi-supervised learning research with limited labeled medical data
  • Fairness and demographic disparity analysis in ophthalmic AI

Out-of-Scope Use

Clinical decisions, patient care, or any commercial application. This dataset shall not be used for clinical decisions at any time.

Access

The "Harvard" designation indicates the dataset originates from the Department of Ophthalmology at Harvard Medical School. It does not imply endorsement, sponsorship, or legal responsibility by Harvard University or Harvard Medical School.

Citation

BibTeX:

bibtex
@inproceedings{luo2023harvard,
  title={Harvard Glaucoma Detection and Progression: A Multimodal Multitask Dataset and Generalization-Reinforced Semi-Supervised Learning},
  author={Luo, Yan and Shi, Min and Tian, Yu and Elze, Tobias and Wang, Mengyu},
  booktitle={Proceedings of the IEEE/CVF International Conference on Computer Vision},
  pages={20471--20482},
  year={2023}
}

APA:

Luo, Y., Shi, M., Tian, Y., Elze, T., & Wang, M. (2023). Harvard Glaucoma Detection and Progression: A Multimodal Multitask Dataset and Generalization-Reinforced Semi-Supervised Learning. Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV 2023), 20471–20482.