genomenet/twin-uniref50-faiss

Twin-Model UniRef50 FAISS Index FAISS index over Twin model mean-pooled embeddings of all UniRef50 representative proteins (~49.8M). The Twin model is a two-tower contrastive encoder fine-tuned on Resnik GO similarity: Custom tower: AA-vocab Transformer → padding-masked mean pool → MLP → 512-dim ESM tower: facebook/esm2_t33_650M_UR50D (frozen) → masked mean pool → MLP → 512-dim Output: concat(custom, esm) → 1024-dim Checkpoint:… See the full description on the dataset page: https://huggingface.co/datasets/genomenet/twin-uniref50-faiss.