Datasetpublic

docdailey/medical-entity-code-mapper-indices

FAISS Indices Directory This directory contains the pre-built FAISS indices for all medical ontologies. Included Indices indices/ ├── icd10_bge_m3/ # ICD-10-CM diagnosis codes (4.4GB) │ ├── faiss.index │ └── metadata.pkl ├── snomed_bge_m3/ # SNOMED CT clinical concepts (3.1GB) │ ├── faiss.index │ └── metadata.pkl ├── loinc_bge_m3/ # LOINC laboratory codes (896MB) │ ├── faiss.index │ └── metadata.pkl ├── rxnorm_bge_m3/ # RxNorm… See the full description on the dataset page: https://huggingface.co/datasets/docdailey/medical-entity-code-mapper-indices.

sourceHugging Faceupdated 1y agoView on Hugging Face

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Dataset Card

FAISS Indices Directory

This directory contains the pre-built FAISS indices for all medical ontologies.

Included Indices

indices/
├── icd10_bge_m3/      # ICD-10-CM diagnosis codes (4.4GB)
│   ├── faiss.index
│   └── metadata.pkl
├── snomed_bge_m3/     # SNOMED CT clinical concepts (3.1GB)
│   ├── faiss.index
│   └── metadata.pkl
├── loinc_bge_m3/      # LOINC laboratory codes (896MB)
│   ├── faiss.index
│   └── metadata.pkl
├── rxnorm_bge_m3/     # RxNorm medication concepts (2.2GB)
│   ├── faiss.index
│   └── metadata.pkl
└── hcpcs_bge_m3/      # HCPCS medical devices & supplies (74MB)
    ├── faiss.index
    └── metadata.pkl

Total Size: ~10.7GB

These indices are essential for the system to function and have been pre-built with:

—BGE-M3 embeddings (1024 dimensions)
—FAISS HNSW indexing for fast similarity search
—Complete medical ontology coverage
—UMLS Metathesaurus synonym enhancement

Note on Repository Size

Due to the large size of these indices, cloning this repository will take some time and require sufficient disk space. Consider using Git LFS or shallow cloning if needed.