depinwang/lsec-sicilian-lonp2-pilot-results-v1

lsec-sicilian-lonp2-pilot-results-v1 Pilot results (5 samples) from re-detecting splice junctions with SICILIAN (Dehghannasiri, Olivieri, Salzman -- Genome Biology 2021) on raw FASTQ, to test whether the LONP2 skipped-exon (SE) event's null result (3x via STARsolo -> JAseC/SHIBA) is a methods artifact. See experiment lsec-sicilian-lonp2 for the full design, red-team review, and debugging history. The LONP2 SE event (hg38) 5' constitutive exon:… See the full description on the dataset page: https://huggingface.co/datasets/depinwang/lsec-sicilian-lonp2-pilot-results-v1.