cBioPortal/datahub
WARNING ⚠️: Accessing datahub data via hugging face is still under construction (use https://github.com/cbioPortal/datahub instead). cBioPortal Datahub These are parquet files generated from https://github.com/cBioPortal/datahub. It combines all studies' sample, patient, and mutation data into parquet files. They were generated using cbiohubpy. How to use Query all mutations of datahub directly in duckdb: SELECT count(distinct (Chromosome, Start_Position… See the full description on the dataset page: https://huggingface.co/datasets/cBioPortal/datahub.
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