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bigbio/drugprot

The DrugProt corpus consists of a) expert-labelled chemical and gene mentions, and (b) all binary relationships between them corresponding to a specific set of biologically relevant relation types.

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Dataset Card

language:

  • en bigbio_language:
  • English license: cc-by-4.0 multilinguality: monolingual bigbiolicenseshortname: CCBY4p0 prettyname: DrugProt homepage: https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vii/track-1/ bigbiopubmed: True bigbiopublic: True bigbiotasks:
  • NAMEDENTITYRECOGNITION
  • RELATION_EXTRACTION ---

Dataset Card for DrugProt

Dataset Description

  • Homepage: https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vii/track-1/
  • Pubmed: True
  • Public: True
  • Tasks: NER,RE

The DrugProt corpus consists of a) expert-labelled chemical and gene mentions, and (b) all binary relationships between them corresponding to a specific set of biologically relevant relation types. The corpus was introduced in context of the BioCreative VII Track 1 (Text mining drug and chemical-protein interactions).

Citation Information

@inproceedings{miranda2021overview,
  title={Overview of DrugProt BioCreative VII track: quality evaluation and large scale text mining of \
        drug-gene/protein relations},
  author={Miranda, Antonio and Mehryary, Farrokh and Luoma, Jouni and Pyysalo, Sampo and Valencia, Alfonso \
        and Krallinger, Martin},
  booktitle={Proceedings of the seventh BioCreative challenge evaluation workshop},
  year={2021}
}