Datasetpublic

arcinstitute/Stack-CellxGene45M

CellxGene 45M Collection A curated subset of CellxGene (~45M cells) used to align the Stack model after pretraining on full human scBaseCount. Selection Criteria ≥ 50,000 cells per dataset ≥ 5 donors per dataset Cell Type Annotations Author-annotated coarse-grained cell type labels were heuristically identified and transferred to adata.obs["author_cell_type"].

sourceHugging Facecc-by-4.0updated 9mo agoView on Hugging Face

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Dataset Card

CellxGene 45M Collection

A curated subset of CellxGene (~45M cells) used to align the Stack model after pretraining on full human scBaseCount.

Selection Criteria

—≥ 50,000 cells per dataset
—≥ 5 donors per dataset

Cell Type Annotations

Author-annotated coarse-grained cell type labels were heuristically identified and transferred to adata.obs["authorcelltype"].