angelolab/ark_example
This dataset contains 11 Field of Views (FOVs), each with 22 channels.
Add noisy ground truth cell table to HuggingFace (#19)
fix_url_paths (#18)
Ezseg Data update (#17)
Fix `plaque.tiff` name in `fov1` of `ez_seg_data/composites` (#16)
Update ez_seg_data to include more cases (#15)
Add ezSegmenter example data (#14)
Properly account for pre and post rownorm in Pixie file names (#13)
Update meta remapping file column names (#12)
Add example data for generalized cell table (#11)
OME-TIFF Example File (#10)
Add a Smaller FOV to the Example Dataset (#8)
Remove example prefix from example cell clustering files (#9)
Change 'segmentation_dir' to 'segmentation/deepcell_output' in cell_clustering_params.json (#7)
Segmentation Dataset - Fix Marker Thresholds File (#6)
Spatial Analysis Datasets (#5)
seg_suffix_change (#4)
use_tiff_suffix (#3)
example_dataset_updates (#1)
dataset name fix in script
dataset name fix in script
dataset name change
fov unzip folder name fix
fov unzip name fix
finding fovs glob fix
download url fix
zip name change
dataset rename, tma->fov mapping
slight updates
added link review
fixed image generation
generator
added changes to ark_example
iterator adjustments
iterator adjustments
base dataset adjustment
base dataset adjustment
remove .vscode
generator
directory
py file change
py file change
fovs.zip fix
_URL_REPO fix
readme contributions update
readme yaml tags
gitignore
added fov zip file
initial commit