altoslabs/primeflow-vcc-datasets
PRiMeFlow VCC Datasets This repository contains the preprocessed datasets, data splits, and gene features used in: PRiMeFlow: Capturing Complex Expression Heterogeneity in Perturbation Response Modelling Zichao Yan, Yan Wu, Mica Xu Ji, Chaitra Agrahar, Esther Wershof, Marcel Nassar, Mehrshad Sadria, Ridvan Eksi, et al. arXiv:2604.13986 PRiMeFlow is an end-to-end flow-matching model of genetic and small-molecule perturbation responses that operates directly in gene… See the full description on the dataset page: https://huggingface.co/datasets/altoslabs/primeflow-vcc-datasets.
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cd4t_perturbseq_D1_Rest_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D1_Stim48hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D1_Stim8hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D2_Rest_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D2_Stim48hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D2_Stim8hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D3_Rest_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D3_Stim48hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D3_Stim8hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D4_Rest_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D4_Stim48hr_preprocessed.h5ad.gzdownload
cd4t_perturbseq_D4_Stim8hr_preprocessed.h5ad.gzdownload
ESM2_pert_features.parquetdownload
feng24_preprocessed.h5ad.gzdownload
jiang24_preprocessed.h5ad.gzdownload
mcfaline23_gxe_preprocessed.h5ad.gzdownload
nadig24_hepg2_preprocessed.h5ad.gzdownload
nadig24_jurkat_preprocessed.h5ad.gzdownload
replogle20_preprocessed.h5ad.gzdownload
replogle22_k562_preprocessed.h5ad.gzdownload
replogle22_rpe1_preprocessed.h5ad.gzdownload
vcc_train_preprocessed.h5ad.gzdownload
