Datasetpublic

Xaira-Therapeutics/X-Atlas-Orion

X-Atlas/Orion X-Atlas: Orion edition (X-Atlas/Orion) is a Perturb-seq atlas containing two genome-wide Fix-Cryopreserve-ScRNAseq (FiCS) Perturb-seq screens that target all human protein-coding genes (n = 18,903 genes). The dataset is comprised of eight million HCT116 and HEK293T cells, each deeply sequenced to a median of 16,000 unique molecular identifiers (UMIs) per cell. The median on-target knockdown efficiency is 75.4% in HCT116 cells and 51.5% in HEK293T cells, with a… See the full description on the dataset page: https://huggingface.co/datasets/Xaira-Therapeutics/X-Atlas-Orion.

sourceHugging Facecc-by-nc-sa-4.0updated 1y agoView on Hugging Face

28likes45kdownloads

17 commits on main

53a5bc91y ago

Upload tutorial for filtering and converting Dataset to AnnData

ann-huang

615117c1y ago

Move HCT116 and HEK293T parquets to data folder

ann-huang

46491bb1y ago