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OpenMed/DDI-Corpus-Processed

DDI Corpus Processed Drug-Drug Interaction (DDI) detection dataset processed from the SemEval-2013 DDI Corpus. Dataset Description This dataset contains drug-drug interaction examples for 5-class classification: MECHANISM: Mechanistic description of how drugs interact (e.g., inhibition, induction) EFFECT: Clinical effect of concurrent use (e.g., increased toxicity, decreased efficacy) ADVISE: Advisory or cautionary information about concurrent use INT: General… See the full description on the dataset page: https://huggingface.co/datasets/OpenMed/DDI-Corpus-Processed.

sourceHugging Facecc-by-nc-4.0updated 8mo agoView on Hugging Face
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Dataset Card

DDI Corpus Processed

Drug-Drug Interaction (DDI) detection dataset processed from the SemEval-2013 DDI Corpus.

Dataset Description

This dataset contains drug-drug interaction examples for 5-class classification:

  • —MECHANISM: Mechanistic description of how drugs interact (e.g., inhibition, induction)
  • —EFFECT: Clinical effect of concurrent use (e.g., increased toxicity, decreased efficacy)
  • —ADVISE: Advisory or cautionary information about concurrent use
  • —INT: General interaction without specific type
  • —NONE: No interaction between the drug pair

Dataset Statistics

SplitTotalMECHANISMEFFECTADVISEINTNONE
Train5,7441,319 (23%)1,687 (29%)826 (14%)189 (3%)1,723 (30%)
Test1,398302 (22%)360 (26%)221 (16%)96 (7%)419 (30%)

Data Format

Each example contains:

  • —sentence: The original sentence containing drug mentions
  • —drug1: First drug entity
  • —drug2: Second drug entity
  • —relation: Interaction type (MECHANISM, EFFECT, ADVISE, INT, or NONE)
  • —source_file: Original XML source file
  • —sentence_id: Original sentence ID
  • —pair_id: Original pair ID

Usage

python
from datasets import load_dataset

dataset = load_dataset("MaziyarPanahi/DDI-Corpus-Processed")

Citation

If you use this dataset, please cite:

bibtex
@article{herrero2013ddi,
  title={The DDI corpus: An annotated corpus with pharmacological substances and drug--drug interactions},
  author={Herrero-Zazo, Mar{\'\i}a and Segura-Bedmar, Isabel and Mart{\'\i}nez, Paloma and Declerck, Thierry},
  journal={Journal of Biomedical Informatics},
  volume={46},
  number={5},
  pages={914--920},
  year={2013}
}

License

CC BY-NC 4.0 (following original DDI Corpus license)