InstaDeepAI/multi_species_genomes
Dataset made of diverse genomes available on NCBI and coming from ~850 different species. Test and validation are made of 50 species each. The rest of the genomes are used for training. Default configuration "6kbp" yields chunks of 6.2kbp (100bp overlap on each side). Similarly, the "12kbp"configuration yields chunks of 12.2kbp. The chunks of DNA are cleaned and processed so that they can only contain the letters A, T, C, G and N.
Update urls.txt (#13)
Update Faecalitalea_cylindroides URL (#3)
Revert Update of Faecalitalea_cylindroides URL
Update Faecalitalea_cylindroides URL
Make it possible to override overlap between consecutive DNA chunks
Remove broken URLs to genome sequences
Upload original_urls.csv (#2)
Update README.md
Update README.md
Update README.md
Create README.md
Upload urls.csv (#1)
Update multi_species_genomes.py
Upload urls.csv
Update multi_species_genomes.py
Update multi_species_genomes.py
Update multi_species_genomes.py
Update multi_species_genomes.py
Update multi_species_genomes.py
Upload urls.csv
Upload urls.csv
Update multi_species_genomes.py
Upload multi_species_genomes.py
Upload urls.csv
initial commit