Datasetpublic

GenerTeam/variant-effect-prediction

Updates [2025-09-09] We have added ClinVar variant effect prediction results to the repository. The evaluation dataset was sourced from SongLab. The benchmark includes comparisons of GENERator against Evo2, NT, NT-v2, HyenaDNA, GPN-MSA, CADD, phyloP, and phastCons. Abouts The human reference genome data is sourced from the NCBI website. We have applied minor formatting adjustments to the dataset to facilitate streamlined data analysis. How to use… See the full description on the dataset page: https://huggingface.co/datasets/GenerTeam/variant-effect-prediction.

sourceHugging Faceupdated 5mo agoView on Hugging Face

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Updates

[2025-09-09] We have added ClinVar variant effect prediction results to the repository. The evaluation dataset was sourced from SongLab. The benchmark includes comparisons of GENERator against Evo2, NT, NT-v2, HyenaDNA, GPN-MSA, CADD, phyloP, and phastCons.

Abouts

The human reference genome data is sourced from the NCBI website.

We have applied minor formatting adjustments to the dataset to facilitate streamlined data analysis.

How to use

python

from datasets import load_dataset

datasets = load_dataset("GenerTeam/variant-effect-prediction")