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Cpt-Nemo/Clustered_UP000005640

Human reference proteome dataset (UP000005640) is first clustered with 80% similarity with MMSeqs2's easy-cluster. The cluster representatives within the FASTA file are then searched against uniref30_2302 database with ColabFold's colabfold_search function. The final aligned a3m files placed in a tarball and compressed with zstd.

sourceHugging Facemitupdated 1y agoView on Hugging Face
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  1. 1.Human reference proteome dataset (UP000005640) is first clustered with 80% similarity with MMSeqs2's easy-cluster.
  2. 2.The cluster representatives within the FASTA file are then searched against uniref302302 database with ColabFold's colabfoldsearch function.
  3. 3.The final aligned a3m files placed in a tarball and compressed with zstd.