Datasetpublic

AI4Protein/DeepET_Topt_AlphaFold2

DeepET_Topt Dataset Description: protein optimum temperature. Number of labels: 1 Problem Type: regression Columns: aa_seq: protein amino acid sequence ss8_seq: DSSP 8 secondary structure sequence foldseek_seq: foldseek 20 3di structural sequence ss3_seq: DSSP 3 secondary structure sequence Github VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning https://github.com/ai4protein/VenusFactory… See the full description on the dataset page: https://huggingface.co/datasets/AI4Protein/DeepET_Topt_AlphaFold2.

sourceHugging Faceapache-2.0updated 1y agoView on Hugging Face

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Dataset Card

DeepET_Topt Dataset

—Description: protein optimum temperature.
—Number of labels: 1
—Problem Type: regression
—Columns:
—aa_seq: protein amino acid sequence
—ss8_seq: DSSP 8 secondary structure sequence
—foldseek_seq: foldseek 20 3di structural sequence
—ss3_seq: DSSP 3 secondary structure sequence

Github

VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning

https://github.com/ai4protein/VenusFactory

Citation

Please cite our work if you use our dataset.

@article{tan2025venusfactory,
  title={VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning},
  author={Tan, Yang and Liu, Chen and Gao, Jingyuan and Wu, Banghao and Li, Mingchen and Wang, Ruilin and Zhang, Lingrong and Yu, Huiqun and Fan, Guisheng and Hong, Liang and Zhou, Bingxin},
  journal={arXiv preprint arXiv:2503.15438},
  year={2025}
}