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pritamdeka/pubmed-abstract-retriever

sourceHugging Faceupdated 5mo agoView on Hugging Face
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App README

PubMed Abstract Retriever

Retrieves relevant PubMed abstracts for scientific articles and extracts evidence sentences.

Features

  • —🔍 Smart Keyphrase Extraction - Automatically extracts key concepts from your article
  • —📊 Semantic Search - Finds most relevant PubMed abstracts using sentence embeddings
  • —🎯 Evidence Extraction - Identifies sentences that support or contradict the article claim
  • —⚡ Fast & Optimized - Uses efficient models for quick results

How to Use

  1. 1.Paste a URL to a scientific/medical article
  2. 2.Select models (defaults work well for most cases)
  3. 3.Click "Submit"
  4. 4.Get JSON output with abstracts and evidence

Models

This app uses:

  • —Sentence Transformers for semantic similarity
  • —SapBERT for biomedical concept clustering
  • —PubMedBERT-MNLI for evidence extraction

Example

Try this example:

  • —URL: https://www.cancer.news/2021-12-22-mrna-vaccines-weaken-immune-system-cause-cancer.html

License

MIT License

Author

Pritam Deka