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pikachuthunderbolt/biomarker-discovery-hcc

sourceHugging Faceupdated 1y agoView on Hugging Face
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App README

title: HCC Biomarker Discovery Platform emoji: ๐Ÿงฌ colorFrom: blue colorTo: purple sdk: streamlit sdkversion: 1.28.0 appfile: app.py pinned: false ---

๐Ÿ”ฌ Clinical HCC Biomarker Discovery Platform

A production-ready tool for liver cancer research and clinical decision support with machine learning and SHAP interpretability.

๐Ÿš€ Features

  • โ€”Advanced Machine Learning with SHAP explanations
  • โ€”Survival Analysis with Kaplan-Meier curves
  • โ€”Biomarker Discovery and validation
  • โ€”EU Regulatory Compliance reporting
  • โ€”Real Data Analysis with automated validation

๐ŸŽฎ Quick Start

  1. 1.Upload your HCC dataset (CSV format)
  2. 2.Explore data quality and clinical patterns
  3. 3.Train ML models with automatic SHAP explanations
  4. 4.Get individual patient predictions with risk stratification
  5. 5.Generate regulatory compliance reports

๐Ÿ“Š Sample Data

The platform works with clinical HCC data including:

  • โ€”Patient demographics (age, gender)
  • โ€”Liver function tests (ALT, AST, bilirubin, albumin)
  • โ€”Tumor markers (AFP)
  • โ€”Genomic data (TERT, CTNNB1, TP53 mutations)
  • โ€”Survival data

๐Ÿฅ Clinical Applications

  • โ€”Early detection of HCC progression
  • โ€”Patient risk stratification
  • โ€”Treatment response prediction
  • โ€”Biomarker discovery
  • โ€”Regulatory submission preparation

Powered by Streamlit โ€ข Enhanced with SHAP Interpretability