biobert
Datasets
All datasets matching “biobert”BioBERT_ItalianFrom this repository you can download the BioBERT_Italian dataset.
BioBERT_Italian is the Italian translation of the original BioBERT dataset, composed by millions of abstracts of PubMed papers.
Due to the unavailability of an Italian equivalent for the millions of abstracts and full-text scientific papers used by English, BERT-based biomedical models, we leveraged machine translation to obtain an Italian biomedical corpus based on PubMed abstracts and train BioBIT.
Corpus statistics:
Total… See the full description on the dataset page: https://huggingface.co/datasets/IVN-RIN/BioBERT_Italian.biobert-ner-fda-recalls-dataset
Dataset Card for FDA CDRH Device Recalls NER Dataset
This is a FDA Medical Device Recalls Dataset Created for Medical Device Named Entity Recognition (NER)
Dataset Details
Dataset Description
This dataset was created for the purpose of performing NER tasks.
It utilizes the OpenFDA Device Recalls dataset, which has been processed and annotated for performing NER.
The Device Recalls dataset has been further processed to extract the recall action element, which… See the full description on the dataset page: https://huggingface.co/datasets/mfarrington/biobert-ner-fda-recalls-dataset.biobert-ner-diseases-dataset
Dataset Card for "biobert-ner-diseases-dataset"
More Information needed
BIOBERT
BIOBERT — Microbiology OA Full-Text Corpus
Purpose: Provide an English Open-Access–only full-text corpus in microbiology and related domains for:
Domain/Task-Adaptive Pretraining (DAPT/TAPT) with Masked Language Modeling (MLM)
Fine-tuning BERT-style models such as BioBERT
⚠️ Copyright / License: This repository includes OA items only (e.g., PMC / Europe PMC OA). Each item must be used under its original upstream license. The fields license_type and license_url are included in… See the full description on the dataset page: https://huggingface.co/datasets/Milad96/BIOBERT.BioBERT-doc-classification-epidemiology
Dataset Card for "BioBERT-doc-classification-epidemiology"
More Information needed
BioBERT-doc-classification-cardio
Dataset Card for "BioBERT-doc-classification-cardio"
More Information needed