datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
yeast-no-GTL-pretokenized-NT-v2yeast-gene-sequence-homology-pretokenized-NTyeast-no-label-pretokenized-NTyeast-GRNsyeast-tf-sequence-homology-pretokenized-NTscripps_yeast_80syeast-seq2expression-dataCheck out https://github.com/Tom-Ellis-Lab/yeast-seq2epxression-benchmark for instructions on using this dataset!
yeast_promoter-expression-datasetDataset-GAL4_YEAST
Description
This dataset contains signle site mutation of protein GAL4_YEAST and the correspond mutation effect score from deep mutation scanning experiment.
Protein Format: AA sequence
Splits
traing: 941
valid: 131
test: 121
Related paper
The dataset is from Deep generative models of genetic variation capture the effects of mutations.
Label
Label means mutation effect score of each protein based on deep mutation scanning experiment, ranging from… See the full description on the dataset page: https://huggingface.co/datasets/SaProtHub/Dataset-GAL4_YEAST.test_yeastyeast-ppiyeast-promoters-noGTL-pretokenized-NTyeast-cv-split3yeast-cv-split4yeast-cv-split2Dataset-GAL4_YEAST
Description
This dataset contains signle site mutation of protein GAL4_YEAST and the correspond mutation effect score from deep mutation scanning experiment.
Protein Format: AA sequence
Splits
traing: 941
valid: 131
test: 121
Related paper
The dataset is from Deep generative models of genetic variation capture the effects of mutations.
Label
Label means mutation effect score of each protein based on deep mutation scanning experiment, ranging from… See the full description on the dataset page: https://huggingface.co/datasets/SeprotHub/Dataset-GAL4_YEAST.yeast-no-GTL-pretokenized-NT-newyeast-cv-split1yeast-cv-split5yeast_kmer_splits