datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
Lurcher_10x
Lurcher 10x Microscopy Dataset
Dataset overview
This dataset consists of 2-D microscopy images of histologically stained 3-D structures in tissue sections through the cerebellum of 21 mouse brains. Animals are grouped into wild-type controls (n = 10) and Lurcher mutant mice (n = 11). The classification task is to distinguish Lurcher mutant mice from wild-type controls.
All images were captured at low magnification (10x) and stained with Cresyl violet, a general… See the full description on the dataset page: https://huggingface.co/datasets/USF-CS-Microscopy-Image-Analysis/Lurcher_10x.malaria-microscopy-vqa
Malaria Microscopy Visual Question Answering (VQA) Dataset
Dataset Description
This dataset contains multi-choice visual question answering pairs for malaria microscopy images, focusing on parasite detection, classification, species identification, and severity assessment.
Dataset Summary
The Malaria Microscopy VQA Dataset is designed for training and evaluating AI systems on medical microscopy image analysis tasks. It contains 67 questions across 59 unique… See the full description on the dataset page: https://huggingface.co/datasets/EricPeter/malaria-microscopy-vqa.Blood-Sample-Microscopic-Image-Classification-Dataset
Blood Sample Microscopic Image Classification Dataset
Current scientific research in medical testing relies on manual analysis by experts, which is time-consuming and prone to human error. Existing automated analysis systems lack precision when processing different types of blood samples. This dataset aims to establish an efficient deep learning model to enhance the classification and detection of different types of blood cells under the microscope, meeting the needs of rapid… See the full description on the dataset page: https://huggingface.co/datasets/Mobiusi/Blood-Sample-Microscopic-Image-Classification-Dataset.microscopy-datasets-index
Microscopy Datasets Index
I kept losing track of which microscopy datasets exist and what format they're in. So I made an index. 300+ open datasets, searchable by domain, task, microscopy type, and license.
What's in here
A single reference file (JSONL and Parquet) cataloging 309 publicly available microscopy datasets. Each entry includes:
id — short slug
name — human-readable dataset name
source — who published it (Broad Institute, Kaggle, ISBI, etc.)
url — direct link… See the full description on the dataset page: https://huggingface.co/datasets/Laborator/microscopy-datasets-index.