datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
eternabench-switch
EternaBench-Switch
EternaBench-Switch is a synthetic RNA dataset consisting of 7,228 riboswitch constructs, designed to explore the structural behavior of RNA molecules that change conformation upon binding to ligands such as FMN, theophylline, or tryptophan.
These riboswitches exhibit different structural states in the presence or absence of their ligands, and the dataset includes detailed measurements of binding affinities (dissociation constants), activation ratios, and RNA… See the full description on the dataset page: https://huggingface.co/datasets/multimolecule/eternabench-switch.ryos-1
RYOS
RYOS is a database of RNA backbone stability in aqueous solution.
RYOS focuses on exploring the stability of mRNA molecules for vaccine applications.
This dataset is part of a broader effort to address one of the key challenges of mRNA vaccines: degradation during shipping and storage.
Statement
Deep learning models for predicting RNA degradation via dual crowdsourcing is published in Nature Machine Intelligence, which is a Closed Access / Author-Fee journal.… See the full description on the dataset page: https://huggingface.co/datasets/multimolecule/ryos-1.ryos-2
RYOS
RYOS is a database of RNA backbone stability in aqueous solution.
RYOS focuses on exploring the stability of mRNA molecules for vaccine applications.
This dataset is part of a broader effort to address one of the key challenges of mRNA vaccines: degradation during shipping and storage.
Statement
Deep learning models for predicting RNA degradation via dual crowdsourcing is published in Nature Machine Intelligence, which is a Closed Access / Author-Fee journal.… See the full description on the dataset page: https://huggingface.co/datasets/multimolecule/ryos-2.rnacentral-modifications
RNAcentral
RNAcentral is a free, public resource that offers integrated access to a comprehensive and up-to-date set of non-coding RNA sequences provided by a collaborating group of Expert Databases representing a broad range of organisms and RNA types.
The development of RNAcentral is coordinated by European Bioinformatics Institute and is supported by Wellcome. Initial funding was provided by BBSRC.
Disclaimer
This is an UNOFFICIAL release of the RNAcentral by The… See the full description on the dataset page: https://huggingface.co/datasets/multimolecule/rnacentral-modifications.