datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
totalsegmentator-organs
TotalSegmentator Organs Dataset
Dataset Description
The TotalSegmentator Organs dataset for multi-organ segmentation (TotalSegmentator Organs subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: adrenal glands, colon, duodenum, esophagus, gallbladder, kidneys, liver, lungs, pancreas, small bowel, spleen, stomach, trachea, bladder
Format: NIfTI (.nii.gz)
Dataset Structure… See the full description on the dataset page: https://huggingface.co/datasets/MedOtter/totalsegmentator-organs.totalsegmentator-vertebrae
TotalSegmentator Vertebrae Dataset
Dataset Description
The TotalSegmentator Vertebrae dataset for vertebrae segmentation (TotalSegmentator Vertebrae subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: cervical, thoracic, and lumbar vertebrae
Format: NIfTI (.nii.gz)
Dataset Structure
Each sample in the JSONL file contains:
{
"image": "path/to/image.nii.gz",
"mask":… See the full description on the dataset page: https://huggingface.co/datasets/MedOtter/totalsegmentator-vertebrae.totalsegmentator-cardiac
TotalSegmentator Cardiac Dataset
Dataset Description
The TotalSegmentator Cardiac dataset for cardiac structures segmentation (TotalSegmentator Cardiac subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: heart, atria, ventricles, aorta, pulmonary artery
Format: NIfTI (.nii.gz)
Dataset Structure
Each sample in the JSONL file contains:
{
"image": "path/to/image.nii.gz"… See the full description on the dataset page: https://huggingface.co/datasets/MedOtter/totalsegmentator-cardiac.totalsegmentator-ribs
TotalSegmentator Ribs Dataset
Dataset Description
The TotalSegmentator Ribs dataset for rib segmentation (TotalSegmentator Ribs subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: individual ribs
Format: NIfTI (.nii.gz)
Dataset Structure
Each sample in the JSONL file contains:
{
"image": "path/to/image.nii.gz",
"mask": "path/to/mask.nii.gz",
"label": ["organ1"… See the full description on the dataset page: https://huggingface.co/datasets/MedOtter/totalsegmentator-ribs.totalsegmentator-muscles
TotalSegmentator Muscles Dataset
Dataset Description
The TotalSegmentator Muscles dataset for muscle segmentation (TotalSegmentator Muscles subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: various muscle groups
Format: NIfTI (.nii.gz)
Dataset Structure
Each sample in the JSONL file contains:
{
"image": "path/to/image.nii.gz",
"mask": "path/to/mask.nii.gz"… See the full description on the dataset page: https://huggingface.co/datasets/MedOtter/totalsegmentator-muscles.totalsegmentator-organs
TotalSegmentator Organs Dataset
Dataset Description
The TotalSegmentator Organs dataset for multi-organ segmentation (TotalSegmentator Organs subset). This dataset contains CT scans with dense segmentation annotations.
Dataset Details
Modality: CT
Target: adrenal glands, colon, duodenum, esophagus, gallbladder, kidneys, liver, lungs, pancreas, small bowel, spleen, stomach, trachea, bladder
Format: NIfTI (.nii.gz)
Dataset Structure… See the full description on the dataset page: https://huggingface.co/datasets/ffjjff813019/totalsegmentator-organs.