datasets
Training and evaluation data, with the modality, task and licence stated up front. Listed live from the Hugging Face Hub.
trec-covid-qrels
Dataset Card for BEIR Benchmark
Dataset Summary
BEIR is a heterogeneous benchmark that has been built from 18 diverse datasets representing 9 information retrieval tasks:
Fact-checking: FEVER, Climate-FEVER, SciFact
Question-Answering: NQ, HotpotQA, FiQA-2018
Bio-Medical IR: TREC-COVID, BioASQ, NFCorpus
News Retrieval: TREC-NEWS, Robust04
Argument Retrieval: Touche-2020, ArguAna
Duplicate Question Retrieval: Quora, CqaDupstack
Citation-Prediction: SCIDOCS
Tweet… See the full description on the dataset page: https://huggingface.co/datasets/BeIR/trec-covid-qrels.long-covid-classification-data
Data Description
Long-COVID related articles have been manually collected by information specialists.Please find further information here.
Size
Training
Development
Test
Total
Positive Examples
215
76
70
345
Negative Examples
199
62
68
345
Total
414
238
138
690
Citation
@article{10.1093/database/baac048,author = {Langnickel, Lisa and Darms, Johannes and Heldt, Katharina and Ducks, Denise and Fluck, Juliane},title = "{Continuous development… See the full description on the dataset page: https://huggingface.co/datasets/llangnickel/long-covid-classification-data.Regional-COVID-19-dataset-Sri-Lanka
Regional COVID-19 Cases in Sri Lanka Dataset
Overview
This repository contains a dataset documenting the COVID-19 cases in Districts of Sri Lanka. The data is organized by year, quarter, month, day, number of cases, and district.
Dataset Information
Year: 2021
Quarters: Qtr 1
Months: January
Days (shows date of update): 1
Data Columns
Year: The year in which the data was recorded.
Quarter: The quarter of the year.
Month: The month… See the full description on the dataset page: https://huggingface.co/datasets/DePubudu/Regional-COVID-19-dataset-Sri-Lanka.COVID-19coronavirusCOVID-19-vaccine-attitude-tweets
Dataset Card for COVID-19-vaccine-attitude-tweets
Dataset Summary
The dataset consists of 2564 manually annotated tweets related to COVID-19 vaccines. The dataset can be used to discover the attitude expressed in the tweet towards the subject of COVID-19 vaccines. Tweets are in English. The dataset was curated in such a way as to maximize the likelihood of tweets with a strong emotional tone. We have assumed the existence of three classes:
PRO (label 0): positive, the… See the full description on the dataset page: https://huggingface.co/datasets/webimmunization/COVID-19-vaccine-attitude-tweets.vaccine-hesitancy-for-covid-19-public-use-microdat
Vaccine Hesitancy for COVID-19: Public Use Microdata Areas (PUMAs)
Description
Due to the change in the survey instrument regarding intention to vaccinate, our estimates for “hesitant or unsure” or “hesitant” derived from April 14-26, 2021, are not directly comparable with prior Household Pulse Survey data and should not be used to examine trends in hesitancy.
To support state and local communication and outreach efforts, ASPE developed state, county, and sub-state level… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/vaccine-hesitancy-for-covid-19-public-use-microdat.Twitter-COVID-19General description:
This dataset comprisses a set of tweets crawled during the COVID-19 pandemic (from March 2020 to June 2021). Tweets are located in two different regions: Spain and USA. This adds value to the collection, as it contains data in two languages.
This data was used as part of a broader study that aimed to determine the evolution of different personality traits and disorders during the pandemic. Thus, weak labels for different dimensions, such as sentiment, personality… See the full description on the dataset page: https://huggingface.co/datasets/citiusLTL/Twitter-COVID-19.provisional-covid-19-death-counts-rates-and-percen
Provisional COVID-19 death counts, rates, and percent of total deaths, by jurisdiction of residence
Description
This file contains COVID-19 death counts, death rates, and percent of total deaths by jurisdiction of residence. The data is grouped by different time periods including 3-month period, weekly, and total (cumulative since January 1, 2020). United States death counts and rates include the 50 states, plus the District of Columbia and New York City. New York state… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/provisional-covid-19-death-counts-rates-and-percen.trec-covid-pl-qrelsPart of BEIR-PL: Zero Shot Information Retrieval Benchmark for the Polish Language.
Link to arxiv: https://arxiv.org/pdf/2305.19840.pdf
Contact: konrad.wojtasik@pwr.edu.pl
long-covid-recovery-interaction-geometry-v0.1
What this dataset does
This dataset tests whether failed Long Covid recovery is better predicted by interaction geometry than by any single biological burden signal.
The target is not disease diagnosis.
The target is failed recovery.
Core stability idea
A patient may show high biological burden and still recover if repair capacity remains strong and omics layers stay coherent.
A patient may show moderate burden and fail to recover if repair capacity weakens and… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/long-covid-recovery-interaction-geometry-v0.1.long-covid-recovery-trajectory-competition-v0.1
What this dataset does
This dataset tests whether a model can identify which Long Covid recovery trajectory is currently emerging from a biological state.
The task is trajectory forecasting.
It is not diagnosis.
Core stability idea
Two patients can show similar symptom burden while moving toward different futures.
The benchmark tests whether models can infer direction rather than classify current severity.
Prediction target
The target column is:… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/long-covid-recovery-trajectory-competition-v0.1.long-covid-closed-loop-recovery-control-v1.0
What this dataset does
This dataset tests whether a model can identify successful closed-loop recovery control in a synthetic Long Covid recovery setting.
The task is not diagnosis.
The task is control success prediction.
Core stability idea
A recovery plan may begin well but fail if feedback is poor, timing is wrong, adaptation is slow, or the control sequence diverges.
This dataset tests whether models can identify when a recovery control loop is likely to… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/long-covid-closed-loop-recovery-control-v1.0.trec-covid_neomme_260m_li
trec-covid_neomme_260m_li
Multi-vector (late-interaction) embeddings of BEIR trec-covid (beir/trec-covid), encoded with
Hcompany/NeoMME-260M-Retriever-ST-late at revision 023be2a8ab9d797f5aa76f5bf8b5dde78d819659.
Source data: ir_datasets beir/trec-covid (ir_datasets 0.6.3), which downloads trec-covid.zip (md5 ce62140cb23feb9becf6270d0d1fe6d1). BEIR also publishes this corpus on the Hub as BeIR/trec-covid, whose card gives this dataset's license; the data here was loaded through… See the full description on the dataset page: https://huggingface.co/datasets/robro612/trec-covid_neomme_260m_li.provisional-covid-19-deaths-by-sex-and-age
Provisional COVID-19 Deaths by Sex and Age
Description
Effective September 27, 2023, this dataset will no longer be updated. Similar data are accessible from wonder.cdc.gov.
Deaths involving COVID-19, pneumonia, and influenza reported to NCHS by sex, age group, and jurisdiction of occurrence.
Dataset Details
Publisher: Centers for Disease Control and Prevention
Temporal Coverage: 2020-01-01/2023-07-29
Geographic Coverage: United States, Puerto Rico
Last… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/provisional-covid-19-deaths-by-sex-and-age.hhs-covid-19-monthly-outcome-survey-wave-03
HHS COVID-19 Monthly Outcome Survey - Wave 03
Description
The Monthly Outcome Survey (MOS) was designed to assess COVID-19 vaccine uptake as well as beliefs, intentions, and behaviors relevant to COVID-19 vaccination at a point in time. The survey fielded on a monthly basis from January 2021 to April 2023. When the MOS first launched, it focused on the primary series of COVID-19 vaccines; in later waves, it was expanded to assess parents’ intentions to get their children… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/hhs-covid-19-monthly-outcome-survey-wave-03.trec-covid_lateon_hpool_regularized
trec-covid_lateon_hpool_regularized
Multi-vector (late-interaction) embeddings of BEIR trec-covid (beir/trec-covid), encoded with
lightonai/LateOn-hpool-regularized at revision 3f9c577e4959ffd717a2565ba8db62f3d5f9d34c.
Source data: ir_datasets beir/trec-covid (ir_datasets 0.6.3), which downloads trec-covid.zip (md5 ce62140cb23feb9becf6270d0d1fe6d1). BEIR also publishes this corpus on the Hub as BeIR/trec-covid, whose card gives this dataset's license; the data here was loaded… See the full description on the dataset page: https://huggingface.co/datasets/robro612/trec-covid_lateon_hpool_regularized.covid-19-reported-patient-impact-and-hospital-capa
COVID-19 Reported Patient Impact and Hospital Capacity by State
Description
After May 3, 2024, this dataset and webpage will no longer be updated because hospitals are no longer required to report data on COVID-19 hospital admissions, and hospital capacity and occupancy data, to HHS through CDC’s National Healthcare Safety Network. Data voluntarily reported to NHSN after May 1, 2024, will be available starting May 10, 2024, at COVID Data Tracker Hospitalizations.
The… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/covid-19-reported-patient-impact-and-hospital-capa.hhs-covid-19-monthly-outcome-survey-wave-10
HHS COVID-19 Monthly Outcome Survey - Wave 10
Description
The Monthly Outcome Survey (MOS) was designed to assess COVID-19 vaccine uptake as well as beliefs, intentions, and behaviors relevant to COVID-19 vaccination at a point in time. The survey fielded on a monthly basis from January 2021 to April 2023. When the MOS first launched, it focused on the primary series of COVID-19 vaccines; in later waves, it was expanded to assess parents’ intentions to get their children… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/hhs-covid-19-monthly-outcome-survey-wave-10.rus-trec-covid-qrelsitalian_long_covid_tweetscovid-tweet-text-classificationCOVID-19-conspiracy-theories-annotated-tweets
Dataset Card for Dataset Name
The dataset includes approximately 54,000 tweet IDs collected through the Twitter API between November 2019 and December 2021, along with annotations indicating whether a tweet supports a particular conspiracy theory.
Dataset Details
Curated by: Izabela Krysinska
Funded by [optional]: EEA Financial Mechanism 2014–2021. Project registration number: 2019/35/J/HS6/03498
Shared by [optional]: Izabela Krysinska
Language(s) (NLP): English… See the full description on the dataset page: https://huggingface.co/datasets/webimmunization/COVID-19-conspiracy-theories-annotated-tweets.long-covid-intervention-competition-geometry-v0.1
What this dataset does
This dataset tests whether a model can identify the highest-leverage intervention pathway for a Long Covid biological state.
The task is intervention selection.
It is not diagnosis.
It is not clinical advice.
Core stability idea
Patients with similar symptoms may require different intervention sequences.
The model must identify the dominant constraint within the system.
The central challenge is to distinguish symptom burden from intervention… See the full description on the dataset page: https://huggingface.co/datasets/ClarusC64/long-covid-intervention-competition-geometry-v0.1.trec-covid_answerai_colbert_small
trec-covid_answerai_colbert_small
Multi-vector (late-interaction) embeddings of BEIR trec-covid (beir/trec-covid), encoded with
lightonai/answerai-colbert-small-v1 at revision e507cd12947a2b4b52201d150967df3c19a90590.
Source data: ir_datasets beir/trec-covid (ir_datasets 0.6.3), which downloads trec-covid.zip (md5 ce62140cb23feb9becf6270d0d1fe6d1). BEIR also publishes this corpus on the Hub as BeIR/trec-covid, whose card gives this dataset's license; the data here was loaded… See the full description on the dataset page: https://huggingface.co/datasets/robro612/trec-covid_answerai_colbert_small.trec-covid_mlateon
trec-covid_mlateon
Multi-vector (late-interaction) embeddings of BEIR trec-covid (beir/trec-covid), encoded with
lightonai/mLateOn at revision edd378f99593c0ac8a15518b97ad89786b02685e.
Source data: ir_datasets beir/trec-covid (ir_datasets 0.6.3), which downloads trec-covid.zip (md5 ce62140cb23feb9becf6270d0d1fe6d1). BEIR also publishes this corpus on the Hub as BeIR/trec-covid, whose card gives this dataset's license; the data here was loaded through ir_datasets, not from that… See the full description on the dataset page: https://huggingface.co/datasets/robro612/trec-covid_mlateon.weekly-united-states-covid-19-cases-and-deaths-by
Weekly United States COVID-19 Cases and Deaths by State - ARCHIVED
Description
Reporting of new Aggregate Case and Death Count data was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. This dataset will receive a final update on June 1, 2023, to reconcile historical data through May 10, 2023, and will remain publicly available.
Aggregate Data Collection Process
Since the start of the COVID-19 pandemic, data have been… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/weekly-united-states-covid-19-cases-and-deaths-by.trec-covid_lateon
trec-covid_lateon
Multi-vector (late-interaction) embeddings of BEIR trec-covid (beir/trec-covid), encoded with
lightonai/LateOn at revision 62911e105059585d244384c7d17826e35f669c17.
Source data: ir_datasets beir/trec-covid (ir_datasets 0.6.3), which downloads trec-covid.zip (md5 ce62140cb23feb9becf6270d0d1fe6d1). BEIR also publishes this corpus on the Hub as BeIR/trec-covid, whose card gives this dataset's license; the data here was loaded through ir_datasets, not from that… See the full description on the dataset page: https://huggingface.co/datasets/robro612/trec-covid_lateon.CovidQCLShhs-covid-19-small-area-estimations-survey-monoval
HHS COVID-19 Small Area Estimations Survey - Monovalent Booster Audience - Wave 19
Description
The goal of the Monthly Outcome Survey (MOS) Small Area Estimations (SAE) are to generate estimates of the proportions of adults, by county and month, who were in the population of interest for the U.S. Department of Health and Human Services’ (HHS) We Can Do This COVID-19 Public Education Campaign. These data are designed to be used by practitioners and researchers to… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/hhs-covid-19-small-area-estimations-survey-monoval.Covid19Tweets