LiteFold/STRING
STRING v12.0 STRING is a protein association network database that integrates experimental, computational, text-mined, and curated evidence for functional and physical protein interactions. Configs Config Raw source Description protein_links protein.links.full.v12.0.txt.gz Protein-protein association edges with all STRING evidence channels and combined_score. protein_info protein.info.v12.0.txt.gz Protein identifiers, preferred names, sizes, and… See the full description on the dataset page: https://huggingface.co/datasets/LiteFold/STRING.
1196
1{2 "compression": "zstd",3 "link_min_combined_score": null,4 "max_rows_per_table": null,5 "num_proc": 32,6 "output_dir": "data",7 "raw_dir": "v12.0",8 "rows_per_chunk": 100000,9 "split_ratios": {10 "test": 0.01,11 "train": 0.98,12 "validation": 0.0113 },14 "split_seed": "string-v12.0",15 "stats": {16 "protein_aliases": {17 "parser": {18 "bad_rows": 0,19 "chunks": 6281,20 "filtered_rows": 0,21 "parsed_rows": 62809692122 },23 "rows": {24 "test": 6279523,25 "train": 615533987,26 "validation": 628341127 },28 "shards": {29 "test": 6281,30 "train": 6281,31 "validation": 628132 }33 },34 "protein_info": {35 "parser": {36 "bad_rows": 0,37 "chunks": 594,38 "filtered_rows": 0,39 "parsed_rows": 5930960440 },41 "rows": {42 "test": 593633,43 "train": 58123200,44 "validation": 59277145 },46 "shards": {47 "test": 594,48 "train": 594,49 "validation": 59450 }51 },52 "protein_links": {53 "parser": {54 "bad_rows": 0,55 "chunks": 275414,56 "filtered_rows": 0,57 "parsed_rows": 2754137283258 },59 "rows": {60 "test": 275437468,61 "train": 26990522006,62 "validation": 27541335863 },64 "shards": {65 "test": 275414,66 "train": 275414,67 "validation": 27541468 }69 },70 "protein_sequences": {71 "parser": {72 "bad_rows": 0,73 "chunks": 594,74 "filtered_rows": 0,75 "parsed_rows": 5930960476 },77 "rows": {78 "test": 593633,79 "train": 58123200,80 "validation": 59277181 },82 "shards": {83 "test": 594,84 "train": 594,85 "validation": 59486 }87 },88 "species": {89 "parser": {90 "bad_rows": 0,91 "chunks": 1,92 "filtered_rows": 0,93 "parsed_rows": 1253594 },95 "rows": {96 "test": 157,97 "train": 12261,98 "validation": 11799 },100 "shards": {101 "test": 1,102 "train": 1,103 "validation": 1104 }105 }106 },107 "tables": [108 "species",109 "protein_info",110 "protein_aliases",111 "protein_sequences",112 "protein_links"113 ]114}115 