opensourcebrain/HodgkinHuxleyTutorial

1<Lems>2 3    <!-- Example with Simple Hodgkin-Huxley cell specifying segment details-->4 5    <!-- This is a file which can be read and executed by the LEMS Interpreter.6         It imports the LEMS definitions of the core NeuroML 2 Components, 7         imports in "pure" NeuroML 2 and contains some LEMS elements for running 8         a simulation -->9 10 11    <Target component="sim1"/>12 13    <Include file="Cells.xml"/>14    <Include file="Networks.xml"/>15    <Include file="Simulation.xml"/>16 17 18    <Include file="HHCellSingleAP.net.nml"/>19    20    <Include file="hhcell.cell.nml"/>21    <Include file="passiveChan.channel.nml"/>22    <Include file="naChan.channel.nml"/>23    <Include file="kChan.channel.nml"/>24 25 26    <Simulation id="sim1" length="50ms" step="0.001ms" target="HHCellNetwork">27    28        <Display id="d1" title="Hodgkin-Huxley Neuron: V (mV)" timeScale="1ms" xmin="-5" xmax="55" ymin="-90" ymax="50">29            <Line id="V" quantity="hhpop/0/hhcell/v" scale="1mV" color="#000000" timeScale="1ms"/>30        </Display>31 32        33        <OutputFile id="of0" fileName="hh_v.dat">34            <OutputColumn id="v" quantity="hhpop/0/hhcell/v"/> 35        </OutputFile>  36    37        38    </Simulation>39 40 41</Lems>42